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PLM4_65_b1_redo_sep16_scaffold_9042

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_9042_trna_1
unknown

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comp(132..204)
DNA (73bp)
transferRNA Ala
PLM4_65_b1_redo_sep16_scaffold_9042_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(321..632)
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM66920.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM4_65_b1_redo_sep16_scaffold_9042_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(691..1488)
DNA (798bp) protein (266aa)
Short chain enoyl-CoA hydratase {ECO:0000313|EMBL:CDM66921.1}; EC=4.2.1.55 {ECO:0000313|EMBL:CDM66921.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
short chain enoyl-CoA hydratase (EC:4.2.1.55)
Short chain enoyl-CoA hydratase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIZ6_CHLTF
PLM4_65_b1_redo_sep16_scaffold_9042_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1824..2330)
DNA (507bp) protein (169aa)
Acetyltransferase Tax=Chamaesiphon minutus PCC 6605 RepID=K9UFV0_9CHRO
acetyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM4_65_b1_redo_sep16_scaffold_9042_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2496..4448)
DNA (1953bp) protein (651aa)
TPR repeat-containing protein Tax=Pedosphaera parvula Ellin514 RepID=B9XPN2_9BACT
Tfp pilus assembly protein PilF {ECO:0000313|EMBL:CDM66633.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_9042_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4591..5145)
DNA (555bp) protein (185aa)
TonB family protein Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F707_ACIC5
TonB family protein {ECO:0000313|EMBL:CDM65243.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
TonB family protein
PLM4_65_b1_redo_sep16_scaffold_9042_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(5305..5604)
DNA (300bp) protein (100aa)
Putative ferredoxin-1 Tax=Leptospira meyeri RepID=K5C197_LEPME
Indolepyruvate ferredoxin oxidreductase, alpha/beta subunit {ECO:0000313|EMBL:CDM66220.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
fdxA; Ferredoxin
PLM4_65_b1_redo_sep16_scaffold_9042_7
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(5703..6359)
DNA (657bp) protein (219aa)
Lipoprotein, putative Tax=Plesiocystis pacifica SIR-1 RepID=A6GID0_9DELT
putative lipoprotein
Tax=RBG_13_Ignavibacteria_36_8_curated
PLM4_65_b1_redo_sep16_scaffold_9042_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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6810..7811
DNA (1002bp) protein (334aa)
DoxX family protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQA1_9CHLR
DoxX family protein {ECO:0000313|EMBL:EFH85749.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
PLM4_65_b1_redo_sep16_scaffold_9042_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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7901..8413
DNA (513bp) protein (171aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJG9_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF42981.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM4_65_b1_redo_sep16_scaffold_9042_10
unknown

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comp(8460..8864)
DNA (405bp) protein (135aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_9042_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8963..10369)
DNA (1407bp) protein (469aa)
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase {ECO:0000313|EMBL:BAH37107.1}; EC=2.7.11.1 {ECO:0000313|EMBL:BAH37107.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Putative serine/threonine protein kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3N0_GEMAT
Displaying 12 items

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