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PLM4_65_b1_redo_sep16_scaffold_5793

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_5793_1
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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285..551
DNA (267bp) protein (89aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4I7_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM00175.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM4_65_b1_redo_sep16_scaffold_5793_2
unknown

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613..1197
DNA (585bp) protein (195aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5793_3
unknown

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1229..1318
DNA (90bp) protein (30aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5793_4
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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1564..2907
DNA (1344bp) protein (448aa)
Regulator of chromosome condensation RCC1 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
chromosome condensation regulator RCC1
Tax=GWB1_Bdellovibrionales_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_5793_5
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

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comp(2928..3725)
DNA (798bp) protein (266aa)
Uncharacterized protein bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
PLM4_65_b1_redo_sep16_scaffold_5793_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3871..4584)
DNA (714bp) protein (238aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036724C8
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_5793_7
RLO_PLX_64_10, Bacteria

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comp(4697..5371)
DNA (675bp) protein (225aa)
Putative uncharacterized protein bin=GWC2_Ignavibacteria_56_12 species=Salinispora arenicola genus=Salinispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_65_b1_redo_sep16_scaffold_5793_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(5400..6101)
DNA (702bp) protein (234aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_65_b1_redo_sep16_scaffold_5793_9
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

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6384..6719
DNA (336bp) protein (112aa)
NADPH:quinone reductase (EC:1.6.5.5)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003690150
Tax=RBG_16_Zixibacteria_50_21_curated
PLM4_65_b1_redo_sep16_scaffold_5793_10
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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comp(6784..7692)
DNA (909bp) protein (303aa)
hypothetical protein Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B4B1C9
Glycine/sarcosine/betaine reductase selenoprotein B (GRDB)
Tax=RBG_16_KB1_OP1_55_9_curated
PLM4_65_b1_redo_sep16_scaffold_5793_11
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(7888..8943)
DNA (1056bp) protein (352aa)
Putative uncharacterized protein Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GHP8_9FIRM
membrane protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM4_65_b1_redo_sep16_scaffold_5793_12
unknown

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9037..9189
DNA (153bp) protein (51aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5793_13
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9170..9808
DNA (639bp) protein (213aa)
Uncharacterized protein Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IFF3_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL57688.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
PLM4_65_b1_redo_sep16_scaffold_5793_14
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9796..10854
DNA (1059bp) protein (353aa)
Radical SAM domain protein Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8INN5_METNO
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ACL58401.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
PLM4_65_b1_redo_sep16_scaffold_5793_15
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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10902..11663
DNA (762bp) protein (254aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037EF70C
hypothetical protein
Gll3385 protein {ECO:0000313|EMBL:BAC91326.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
PLM4_65_b1_redo_sep16_scaffold_5793_16
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11673..12362)
DNA (690bp) protein (230aa)
Glycosyl transferase family protein Tax=Methylobacterium sp. GXF4 RepID=I9CHA2_9RHIZ
Glycosyl transferase family protein {ECO:0000313|EMBL:EIZ83402.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
family 2 glycosyl transferase
PLM4_65_b1_redo_sep16_scaffold_5793_17
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12371..13009)
DNA (639bp) protein (213aa)
NAD-dependent epimerase/dehydratase Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V0K1_TERSS
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADV84484.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
Displaying 17 items

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