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PLM4_65_b1_redo_sep16_scaffold_6181

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_6181_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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175..771
DNA (597bp) protein (199aa)
Cell wall-associated hydrolase, invasion-associated protein {ECO:0000313|EMBL:CDM65293.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
NLP/P60 protein bin=GWF2_Syntrophobacterales_56_9 species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
spl; peptidoglycan lytic protein P45
PLM4_65_b1_redo_sep16_scaffold_6181_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(933..1160)
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65292.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM4_65_b1_redo_sep16_scaffold_6181_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1233..1652)
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Sorangium cellulosum (strain So ce56) RepID=A9GVK1_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN90767.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
PLM4_65_b1_redo_sep16_scaffold_6181_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1693..2853)
DNA (1161bp) protein (387aa)
Deoxyhypusine synthase Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NLS6_GLOVI bin=16ft_combo_ws3_JS1 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
deoxyhypusine synthase-like protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_6181_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2948..4252)
DNA (1305bp) protein (435aa)
CBS domain containing protein Tax=uncultured Acidobacteria bacterium RepID=H5SIW6_9BACT
CBS domain-containing protein {ECO:0000313|EMBL:CDM65290.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_6181_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4642..5139)
DNA (498bp) protein (166aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Endoribonuclease YbeY Tax=uncultured Acidobacteria bacterium RepID=H5SIW5_9BACT
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_6181_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(5194..6150)
DNA (957bp) protein (319aa)
Phosphate starvation-inducible protein PhoH Tax=uncultured Acidobacteria bacterium RepID=H5SIW4_9BACT
Phosphate starvation-inducible protein PhoH, predicted ATPase {ECO:0000313|EMBL:CDM65288.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
phosphate starvation-inducible protein ATPase PhoH
PLM4_65_b1_redo_sep16_scaffold_6181_8
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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6437..6706
DNA (270bp) protein (90aa)
30S ribosomal protein S20 Tax=uncultured Acidobacteria bacterium RepID=H5SFW3_9BACT
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
rpsT; 30S ribosomal protein S20
PLM4_65_b1_redo_sep16_scaffold_6181_9
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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6816..7379
DNA (564bp) protein (188aa)
Uncharacterized protein Tax=Microcoleus vaginatus FGP-2 RepID=F5UKZ1_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:EGK85646.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_6181_10
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7850..8350
DNA (501bp) protein (167aa)
Uncharacterized protein Tax=Flavobacterium enshiense DK69 RepID=V6S9C8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO93984.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_6181_11
Jannaschia aquimarina, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8353..8580
DNA (228bp) protein (76aa)
hypothetical protein Tax=Martelella mediterranea RepID=UPI000379096B
Jannaschia aquimarina strain GSW-M26 jaqu_contig000043, whole genome shotgun sequence {ECO:0000313|EMBL:KIT15790.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia aquimarina.;"
Putative threonine efflux protein
PLM4_65_b1_redo_sep16_scaffold_6181_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8558..9421)
DNA (864bp) protein (288aa)
type 11 methyltransferase Tax=Rhizobium leguminosarum RepID=UPI000362E98B
putative ubiquinone/menaquinone biosynthesis methyltransferase UbiE
Putative ubiquinone/menaquinone biosynthesis methyltransferase UbiE {ECO:0000313|EMBL:AHG92915.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_6181_13

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comp(9461..10159)
DNA (699bp) protein (233aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034BBF7C
Pirin {ECO:0000313|EMBL:AIA11757.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Pirin domain protein
PLM4_65_b1_redo_sep16_scaffold_6181_14
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(10217..10720)
DNA (504bp) protein (168aa)
Putative GAF sensor protein Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZAM4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KER10439.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
GAF sensor protein
PLM4_65_b1_redo_sep16_scaffold_6181_15
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10929..12587)
DNA (1659bp) protein (553aa)
Oxidoreductase alpha (Molybdopterin) subunit Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UI61_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:KFA91273.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
oxidoreductase alpha (molybdopterin) subunit
Displaying 15 items

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