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PLM4_65_b1_redo_sep16_scaffold_2162

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2162_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(415..1284)
DNA (870bp) protein (290aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225, ECO:0000256|SAAS:SAAS00064088};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Cyclic pyranopterin monophosphate synthase Tax=Pedosphaera parvula Ellin514 RepID=B9XSN7_9BACT
GTP cyclohydrolase subunit MoaA
PLM4_65_b1_redo_sep16_scaffold_2162_2

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comp(1779..3512)
DNA (1734bp) protein (578aa)
Marine sediment metagenome DNA, contig: S01H1_S01149 {ECO:0000313|EMBL:GAF95881.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_65_b1_redo_sep16_scaffold_2162_3
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

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comp(4067..4957)
DNA (891bp) protein (297aa)
Uncharacterized protein Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3M1A1_ANAVT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA25242.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 29413 / PCC 7937).;"
PLM4_65_b1_redo_sep16_scaffold_2162_4
unknown

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5233..5748
DNA (516bp) protein (172aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2162_5
unknown

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comp(5772..6020)
DNA (249bp) protein (83aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2162_6
unknown

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comp(6357..6545)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2162_7
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6959..7933
DNA (975bp) protein (325aa)
Alpha/beta hydrolase fold protein Tax=Nitrosomonas sp. AL212 RepID=F9ZKM3_9PROT
alpha/beta hydrolase fold
Alpha/beta hydrolase fold {ECO:0000313|EMBL:BAQ17022.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
PLM4_65_b1_redo_sep16_scaffold_2162_8
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(8012..9541)
DNA (1530bp) protein (510aa)
Peptidase dimerization domain protein Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ER18_EMTOG
peptidase dimerization domain protein
Peptidase dimerization domain protein {ECO:0000313|EMBL:AFK02121.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
PLM4_65_b1_redo_sep16_scaffold_2162_9
unknown

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comp(9620..9955)
DNA (336bp) protein (112aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2162_10
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

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comp(10085..11797)
DNA (1713bp) protein (571aa)
Uncharacterized protein Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A7Y2_NATTJ
hypothetical protein
Tax=BJP_IG2158_Zixibacteria_48_33
PLM4_65_b1_redo_sep16_scaffold_2162_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12029..13039)
DNA (1011bp) protein (337aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Epoxyqueuosine reductase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHC9_CHLTF
iron-sulfur cluster binding protein
PLM4_65_b1_redo_sep16_scaffold_2162_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(13141..13656)
DNA (516bp) protein (172aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM66018.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM4_65_b1_redo_sep16_scaffold_2162_13
Paenibacillus sp. KSM-M126, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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13966..14658
DNA (693bp) protein (231aa)
serine/threonine protein kinase (EC:2.7.11.1 3.4.24.35)
Putative glycosidase Tax=Paenibacillus sp. KSM-M126 RepID=B1Q2N8_9BACL
Putative glycosidase {ECO:0000313|EMBL:BAG15879.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. KSM-M126.;"
PLM4_65_b1_redo_sep16_scaffold_2162_14
unknown

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14854..15834
DNA (981bp) protein (327aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2162_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(15942..17015)
DNA (1074bp) protein (358aa)
AmmeMemoRadiSam system radical SAM enzyme {ECO:0000313|EMBL:CDM64616.1}; EC=1.97.1.4 {ECO:0000313|EMBL:CDM64616.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4) bin=bin3_NC10 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
PLM4_65_b1_redo_sep16_scaffold_2162_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

17111..17800
DNA (690bp) protein (230aa)
Probable hydrolase Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6NCA4_RHOPA
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:CDM64615.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hydrolase
PLM4_65_b1_redo_sep16_scaffold_2162_17
unknown

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comp(17883..18089)
DNA (207bp) protein (69aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2162_18
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(18188..19033)
DNA (846bp) protein (282aa)
Uncharacterized protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEA7_THET1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ41263.1}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
PLM4_65_b1_redo_sep16_scaffold_2162_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(19046..19777)
DNA (732bp) protein (244aa)
hypothetical protein Tax=Gracilimonas tropica RepID=UPI00036B6ECB
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ECF family RNA polymerase sigma factor
PLM4_65_b1_redo_sep16_scaffold_2162_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(19990..21093)
DNA (1104bp) protein (368aa)
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:CDM64614.1}; EC=4.1.2.13 {ECO:0000313|EMBL:CDM64614.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Fructose-bisphosphate aldolase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B3L0_HERA2
fructose-bisphosphate aldolase
PLM4_65_b1_redo_sep16_scaffold_2162_21
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(21355..21582)
DNA (228bp) protein (76aa)
Uncharacterized protein Tax=Planctomyces maris DSM 8797 RepID=A6C6T8_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL59700.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
Displaying 21 items

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