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PLM4_65_b1_redo_sep16_scaffold_2396

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2396_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2..496)
DNA (495bp) protein (165aa)
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:CDM64103.1}; EC=2.7.1.2 {ECO:0000313|EMBL:CDM64103.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Glucokinase bin=GWD2_Nitrospirae-related_57_8 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
ROK family protein
PLM4_65_b1_redo_sep16_scaffold_2396_2
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

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comp(493..2634)
DNA (2142bp) protein (714aa)
hypothetical protein Tax=Nocardioides sp. Iso805N RepID=UPI00035ECFFD
Glucoamylase {ECO:0000313|EMBL:KGI81041.1}; species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
glucoamylase
PLM4_65_b1_redo_sep16_scaffold_2396_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2787..4013)
DNA (1227bp) protein (409aa)
Xylose ABC transporter membrane protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT92_KORVE
Xylose ABC transporter membrane protein {ECO:0000313|EMBL:CDM64102.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
sugar ABC transporter permease
PLM4_65_b1_redo_sep16_scaffold_2396_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4216..5751)
DNA (1536bp) protein (512aa)
Monosaccharide-transporting ATPase {ECO:0000256|SAAS:SAAS00041637}; EC=3.6.3.17 {ECO:0000256|SAAS:SAAS00041637};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Xylose import ATP-binding protein XylG Tax=Thermoanaerobacter RepID=XYLG_THEP3
ABC transporter-like protein
PLM4_65_b1_redo_sep16_scaffold_2396_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(6252..7331)
DNA (1080bp) protein (360aa)
Ribose ABC transporter periplasmic protein Tax=Anoxybacillus flavithermus AK1 RepID=M8D6V0_9BACI
Xylose-binding protein {ECO:0000313|EMBL:CDM64100.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rbsB; ribose ABC transporter periplasmic protein
PLM4_65_b1_redo_sep16_scaffold_2396_6

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8025..11738
DNA (3714bp) protein (1238aa)
Cna B domain-containing protein Tax=uncultured bacterium 253 RepID=E3T743_9BACT
Cna B domain-containing protein {ECO:0000313|EMBL:ADC36137.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium 253.;"
CnaB domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_2396_7

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12016..14235
DNA (2220bp) protein (740aa)
Glycoside hydrolase family 3 protein Tax=uncultured bacterium 253 RepID=E3T742_9BACT
Glycoside hydrolase family 3 protein {ECO:0000313|EMBL:ADC36136.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium 253.;"
glycoside hydrolase
PLM4_65_b1_redo_sep16_scaffold_2396_8

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14429..15838
DNA (1410bp) protein (470aa)
Putative uncharacterized protein Tax=uncultured bacterium 253 RepID=E3T740_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ADC36134.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium 253.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2396_9
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(16395..17834)
DNA (1440bp) protein (480aa)
Alpha amylase catalytic region Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X723_ACISM
alpha amylase
Alpha amylase catalytic region {ECO:0000313|EMBL:ADW71132.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
PLM4_65_b1_redo_sep16_scaffold_2396_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(18067..19533)
DNA (1467bp) protein (489aa)
Major facilitator superfamily (MFS) transporter Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRJ8_KORVE
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AHG93801.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_2396_11
Agarivorans albus, Agarivorans, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19773..20513)
DNA (741bp) protein (247aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:GAD04314.1}; EC=1.1.1.100 {ECO:0000313|EMBL:GAD04314.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Agarivorans.;" source="Agarivorans albus MKT 106.;"
3-oxoacyl-[acyl-carrier protein] reductase Tax=Agarivorans albus MKT 106 RepID=R9PSI5_AGAAL
short-chain dehydrogenase/reductase sdr
Displaying 11 items

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