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PLM4_65_b1_redo_sep16_scaffold_2533

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2533_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3..353
DNA (351bp) protein (117aa)
Glycerol-3-phosphate acyltransferase Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B0M2_TURPD
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
acyl-phosphate glycerol-3-phosphate acyltransferase
PLM4_65_b1_redo_sep16_scaffold_2533_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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353..1360
DNA (1008bp) protein (336aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394, ECO:0000256|RuleBase:RU000439};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] Tax=uncultured Acidobacteria bacterium RepID=H5SFV8_9BACT
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
PLM4_65_b1_redo_sep16_scaffold_2533_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1546..1989
DNA (444bp) protein (148aa)
SsrA-binding protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEI7_CHLTF
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
SsrA-binding protein
PLM4_65_b1_redo_sep16_scaffold_2533_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2029..3546
DNA (1518bp) protein (506aa)
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; EC=3.4.11.1 {ECO:0000256|SAAS:SAAS00015246};; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase Tax=uncultured Acidobacteria bacterium RepID=H5SFV6_9BACT
PLM4_65_b1_redo_sep16_scaffold_2533_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3937..4776
DNA (840bp) protein (280aa)
Curved DNA-binding protein Tax=uncultured Acidobacteria bacterium RepID=H5SFV3_9BACT
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:CDM65973.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
heat shock protein DnaJ-like protein
PLM4_65_b1_redo_sep16_scaffold_2533_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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4814..5668
DNA (855bp) protein (285aa)
PBS lyase HEAT domain protein repeat-containing protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UU23_ROSS1
PBS lyase HEAT-like repeat protein {ECO:0000313|EMBL:CDM65975.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
HEAT repeat-containing PBS lyase
PLM4_65_b1_redo_sep16_scaffold_2533_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(5767..6981)
DNA (1215bp) protein (405aa)
C-terminal, D2-small domain, of ClpB protein, ATPase family associated with various cellular activities (AAA) Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIL2_CHLTF
ATPase family protein associated with various cellular activities (AAA) {ECO:0000313|EMBL:CDM65976.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ATPase
PLM4_65_b1_redo_sep16_scaffold_2533_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(7443..8762)
DNA (1320bp) protein (440aa)
Myo-inositol-1-phosphate synthase {ECO:0000313|EMBL:CDM65977.1}; EC=5.5.1.4 {ECO:0000313|EMBL:CDM65977.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Myo-inositol-1-phosphate synthase (EC:5.5.1.4)
Myo-inositol-1-phosphate synthase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGU2_CHLTF
PLM4_65_b1_redo_sep16_scaffold_2533_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(8906..9733)
DNA (828bp) protein (276aa)
hypothetical protein Tax=Brevibacillus sp. phR RepID=UPI00031C213A
glycerophosphodiester phosphodiesterase
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:CBE69675.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_2533_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(9840..10799)
DNA (960bp) protein (320aa)
Uncharacterized protein Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KD60_ELUMP
Uncharacterized protein {ECO:0000313|EMBL:CDM65981.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2533_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10796..11311)
DNA (516bp) protein (172aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGF9_CHLTF
Phospholipid methyltransferase {ECO:0000313|EMBL:CDM65982.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
phospholipid methyltransferase
PLM4_65_b1_redo_sep16_scaffold_2533_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(11580..12638)
DNA (1059bp) protein (353aa)
ADP-heptose:LPS heptosyltransferase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDA7_CHLTF
Lipopolysaccharide heptosyltransferase I {ECO:0000313|EMBL:CDM65983.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ADP-heptose--LPS heptosyltransferase
PLM4_65_b1_redo_sep16_scaffold_2533_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12814..13320)
DNA (507bp) protein (169aa)
Cytidyltransferase-related domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEC4_CHLTF
Cytidyltransferase-related enzyme {ECO:0000313|EMBL:CDM65984.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
cytidyltransferase-related domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_2533_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13330..14346)
DNA (1017bp) protein (339aa)
d-beta-d-heptose 7-phosphate kinase (EC:2.7.1.-) bin=CNBR_ACIDO species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase (EC:2.7.7.-)
ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase {ECO:0000313|EMBL:CDM65985.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM4_65_b1_redo_sep16_scaffold_2533_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(14466..15065)
DNA (600bp) protein (200aa)
Histidinol-phosphate phosphatase family protein {ECO:0000313|EMBL:CDM65986.1}; EC=3.1.3.82 {ECO:0000313|EMBL:CDM65986.1};; EC=3.1.3.83 {ECO:0000313|EMBL:CDM65986.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
histidinol-phosphate phosphatase family protein/HAD-superfamily hydrolase (EC:3.1.3.-)
D,D-heptose 1,7-bisphosphate phosphatase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIS6_CHLTF
PLM4_65_b1_redo_sep16_scaffold_2533_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(15256..16380)
DNA (1125bp) protein (375aa)
Lipopolysaccharide heptosyltransferase II Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK17_CHLTF
Lipopolysaccharide heptosyltransferase II {ECO:0000313|EMBL:CDM65987.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ADP-heptose--LPS heptosyltransferase
PLM4_65_b1_redo_sep16_scaffold_2533_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(16577..17416)
DNA (840bp) protein (280aa)
nucleoside-diphosphate-sugar epimerase (EC:5.1.3.10)
Nucleoside-diphosphate-sugar epimerase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDD2_CHLTF
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:CDM65988.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM4_65_b1_redo_sep16_scaffold_2533_18
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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comp(17453..18520)
DNA (1068bp) protein (356aa)
TrkA-N domain protein Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A8C9_THEID
TrkA-N domain-containing protein
Tax=RBG_16_Nitrospirae_43_8_curated
PLM4_65_b1_redo_sep16_scaffold_2533_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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18782..19897
DNA (1116bp) protein (372aa)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:CDM65989.1}; EC=2.4.1.129 {ECO:0000313|EMBL:CDM65989.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
penicillin-binding protein (EC:2.4.1.129)
Penicillin-binding protein, 1A family Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGV5_CHLTF
Displaying 19 items

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