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PLM4_65_b1_redo_sep16_scaffold_11434

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_11434_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(1..357)
DNA (357bp) protein (119aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_65_b1_redo_sep16_scaffold_11434_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1465..1746
DNA (282bp) protein (94aa)
Bacterial nucleoid DNA-binding protein {ECO:0000313|EMBL:CDM65604.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA-binding protein, IHF-related
PLM4_65_b1_redo_sep16_scaffold_11434_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2062..2313
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65603.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM4_65_b1_redo_sep16_scaffold_11434_4
unknown

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comp(2543..2785)
DNA (243bp) protein (81aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_11434_trna_1
unknown

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2803..2876
DNA (74bp)
transferRNA His
PLM4_65_b1_redo_sep16_scaffold_11434_5
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2924..3751
DNA (828bp) protein (276aa)
Alpha/beta hydrolase fold containing protein Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GFJ2_NITSI
alpha/beta hydrolase fold
Alpha/beta hydrolase fold {ECO:0000313|EMBL:BAQ17022.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
PLM4_65_b1_redo_sep16_scaffold_11434_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3818..4906)
DNA (1089bp) protein (363aa)
Dienelactone hydrolase Tax=Pedosphaera parvula Ellin514 RepID=B9X9Q3_9BACT
Dienelactone hydrolase {ECO:0000313|EMBL:EEF63201.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Dienelactone hydrolase-related enzyme
PLM4_65_b1_redo_sep16_scaffold_11434_7

Not on your lists

comp(5071..5589)
DNA (519bp) protein (173aa)
Putative uncharacterized protein Tax=Chloroflexus RepID=A9WK54_CHLAA
DinB superfamily {ECO:0000313|EMBL:AIA13471.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_11434_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

5783..6049
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM66821.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM4_65_b1_redo_sep16_scaffold_11434_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6100..7074)
DNA (975bp) protein (325aa)
hypothetical protein Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B51F9B
von Willebrand factor type A domain {ECO:0000313|EMBL:CDM65574.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM4_65_b1_redo_sep16_scaffold_11434_10
unknown

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7290..8072
DNA (783bp) protein (261aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_11434_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8119..8928)
DNA (810bp) protein (270aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Displaying 12 items

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