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PLM4_65_b1_redo_sep16_scaffold_3645

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_3645_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(3..2324)
DNA (2322bp) protein (774aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000367DB50
Cna B domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_3645_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2636..3403
DNA (768bp) protein (256aa)
GntR domain protein Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X4A4_ACISM
GntR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_3645_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3400..4773
DNA (1374bp) protein (458aa)
Alpha-L-fucosidase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024D2_SOLUE
glycoside hydrolase family 29 (alpha-L-fucosidase)
Glycoside hydrolase family 29 (Alpha-L-fucosidase) {ECO:0000313|EMBL:AHG93187.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_3645_4
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4784..6952
DNA (2169bp) protein (723aa)
Alpha-glucosidase {ECO:0000313|EMBL:AEE51608.1}; EC=3.2.1.20 {ECO:0000313|EMBL:AEE51608.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
alpha-glucosidase Tax=Rudanella lutea RepID=UPI0003653888
alpha-glucosidase
PLM4_65_b1_redo_sep16_scaffold_3645_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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6965..8977
DNA (2013bp) protein (671aa)
Glycosyl-hydrolase 97 N-terminal/Glycosyl-hydrolase 97 C-terminal, oligomerisation/Glycoside hydrolase 97 {ECO:0000313|EMBL:CDM65029.1}; EC=3.2.1.20 {ECO:0000313|EMBL:CDM65029.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Putative uncharacterized protein Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0Y2_PEDHD
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3645_6
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8997..9440)
DNA (444bp) protein (148aa)
DoxD-like family protein Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CF51_MYXFH
DoxD-like family protein
DoxD-like family protein {ECO:0000313|EMBL:AEI68639.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
PLM4_65_b1_redo_sep16_scaffold_3645_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(9482..10069)
DNA (588bp) protein (196aa)
Methyltransferase type 11 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBR9_ANADF
type 11 methyltransferase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_3645_8
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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10138..10842
DNA (705bp) protein (235aa)
(alpha)-aspartyl dipeptidase Tax=Saccharopolyspora spinosa RepID=UPI0002379DC7
peptidase E
Peptidase {ECO:0000313|EMBL:EXU92080.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
PLM4_65_b1_redo_sep16_scaffold_3645_9
RLO_PLX_64_10, Bacteria

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10907..11464
DNA (558bp) protein (186aa)
Uncharacterized protein Tax=Desulfococcus multivorans DSM 2059 RepID=S7TNR0_DESML
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_65_b1_redo_sep16_scaffold_3645_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

11591..12094
DNA (504bp) protein (168aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_3645_11
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12113..14635
DNA (2523bp) protein (841aa)
Beta-hexosaminidase Hex {ECO:0000313|EMBL:ELX09730.1}; EC=3.2.1.52 {ECO:0000313|EMBL:ELX09730.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
hypothetical protein Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003801F88
beta-N-acetylhexosaminidase
PLM4_65_b1_redo_sep16_scaffold_3645_12
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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14835..16301
DNA (1467bp) protein (489aa)
aminopeptidase P (EC:3.4.11.9); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
proline aminopeptidase P II
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
PLM4_65_b1_redo_sep16_scaffold_3645_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

16315..16539
DNA (225bp) protein (75aa)
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:CDM64610.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
xylose isomerase domain-containing protein bin=CNBR_ACIDO species=Caldicellulosiruptor obsidiansis genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Displaying 13 items

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