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PLM4_65_b1_redo_sep16_scaffold_3712

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_3712_1
unknown

Not on your lists

comp(2..124)
DNA (123bp) protein (41aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3712_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(182..2785)
DNA (2604bp) protein (868aa)
Chaperone bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
ATP-dependent chaperone ClpB
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_3712_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(3148..4395)
DNA (1248bp) protein (416aa)
Transporter, UIT6 family bin=GWA2_Methylomirabilis_73_35 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative signal peptide
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_3712_4
unknown

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comp(4466..4762)
DNA (297bp) protein (99aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3712_5
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

4987..6405
DNA (1419bp) protein (473aa)
Soluble pyridine nucleotide transhydrogenase bin=GWC2_Deltaproteobacteria_56_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
pyridine nucleotide-disulfide oxidoreductase dimerization region
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_3712_6
unknown

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comp(6321..6509)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3712_7
unknown

Not on your lists

6984..7538
DNA (555bp) protein (185aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3712_8

Not on your lists

comp(7564..8145)
DNA (582bp) protein (194aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K7PFJ6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AFK83593.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM4_65_b1_redo_sep16_scaffold_3712_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8148..9317)
DNA (1170bp) protein (390aa)
SAM-dependent methyltransferase; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] bin=CNBR_ACIDO species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
SAM-dependent methyltransferase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_3712_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

9675..10928
DNA (1254bp) protein (418aa)
Efflux transporter, RND family, MFP subunit Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXY2_OPITP
RND family efflux transporter MFP subunit
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_65_b1_redo_sep16_scaffold_3712_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

10942..11670
DNA (729bp) protein (243aa)
ABC transporter related Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXY1_OPITP
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_3712_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

11670..14102
DNA (2433bp) protein (811aa)
Permease Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXW4_OPITP
permease
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_3712_13
RBG_13_Aminicenantes_64_14_curated, Aminicenantes, Bacteria

Not on your lists

14173..14469
DNA (297bp) protein (99aa)
Fis family transcriptional regulator Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XJ05_DESMR
two component sigma-54 specific Fis family transcriptional regulator
Tax=RBG_13_Aminicenantes_64_14_curated
PLM4_65_b1_redo_sep16_scaffold_3712_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14486..16756
DNA (2271bp) protein (757aa)
Gll1201 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NLC5_GLOVI
permease
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying 14 items

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