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PLM4_65_b1_redo_sep16_scaffold_222

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_222_1
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..865
DNA (864bp) protein (288aa)
Conserved uncharacterized protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08WH1_STIAD
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO69816.1}; Uncharacterized protein {ECO:0000313|EMBL:EAU64834.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM4_65_b1_redo_sep16_scaffold_222_2
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

911..2467
DNA (1557bp) protein (519aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIB2_KORVE
ypothetical protein
Tax=RBG_13_Caldithrix_44_9_curated
PLM4_65_b1_redo_sep16_scaffold_222_3
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

2464..4614
DNA (2151bp) protein (717aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003740A45
metalloendopeptidase-like membrane protein
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
PLM4_65_b1_redo_sep16_scaffold_222_4
unknown

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comp(4636..5334)
DNA (699bp) protein (233aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_222_5
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5525..8065
DNA (2541bp) protein (847aa)
autotransporter Tax=Pseudomonas fluorescens RepID=UPI00031282A9
Strain MEP34 contig_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIP97287.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
autotransporter
PLM4_65_b1_redo_sep16_scaffold_222_6
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

8075..10528
DNA (2454bp) protein (818aa)
Phosphorylase Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LIA7_SYNFM
glycogen/starch/alpha-glucan phosphorylase
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM4_65_b1_redo_sep16_scaffold_222_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(10540..11472)
DNA (933bp) protein (311aa)
mhd:Marky_1959 protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
cytochrome oxidase assembly protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_222_8
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11544..12902
DNA (1359bp) protein (453aa)
Uncharacterized protein Tax=Fibrisoma limi BUZ 3 RepID=I2GLW5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH54891.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
oxidoreductase
PLM4_65_b1_redo_sep16_scaffold_222_9
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(12912..13832)
DNA (921bp) protein (307aa)
type I phosphodiesterase/nucleotide pyrophosphatase bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
type I phosphodiesterase/nucleotide pyrophosphatase
Tax=BJP_IG2157_Anaerolineales_55_23
PLM4_65_b1_redo_sep16_scaffold_222_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13978..17853)
DNA (3876bp) protein (1292aa)
Phosphoribosylformylglycinamidine synthase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QGB0_AZOSU
phosphoribosylformylglycinamidine synthase, single chain form
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_65_b1_redo_sep16_scaffold_222_11
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17871..19199
DNA (1329bp) protein (443aa)
Putative uncharacterized protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGF3_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS27799.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM4_65_b1_redo_sep16_scaffold_222_12
Chlorobium chlorochromatii, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

19221..20516
DNA (1296bp) protein (432aa)
Magnesium and cobalt transport protein CorA Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3AQ89_CHLCH
magnesium/cobalt transporter CorA
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium chlorochromatii (strain CaD3).;"
PLM4_65_b1_redo_sep16_scaffold_222_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(20519..22873)
DNA (2355bp) protein (785aa)
Transcriptional regulator, CadC Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WH4_SOLUE
transcriptional regulator CadC
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_222_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22909..23814
DNA (906bp) protein (302aa)
Hypothetical membrane protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9B4_GEMAT
protein of unknown function DUF81
Uncharacterized protein {ECO:0000313|EMBL:AHG92471.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_222_15
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23816..24934)
DNA (1119bp) protein (373aa)
muconate-lactonizing protein Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4B6CE
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ADB18927.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
PLM4_65_b1_redo_sep16_scaffold_222_16
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(25002..26552)
DNA (1551bp) protein (517aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1XRZ1_9BACT
4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_222_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

26629..27816
DNA (1188bp) protein (396aa)
UPI0003074F49 related cluster Tax=unknown RepID=UPI0003074F49
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_222_18

Not on your lists

comp(27840..28448)
DNA (609bp) protein (203aa)
oxidoreductase domain-containing protein bin=CNBR_ACIDO species=Mariniradius saccharolyticus genus=Mariniradius taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48736.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
dehydrogenase
PLM4_65_b1_redo_sep16_scaffold_222_19
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28453..29820
DNA (1368bp) protein (456aa)
Uncharacterized protein Tax=Cystobacter fuscus DSM 2262 RepID=S9P5I3_9DELT
amino acid permease-associated protein
Amino acid permease-associated protein {ECO:0000313|EMBL:AKD55219.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
PLM4_65_b1_redo_sep16_scaffold_222_20
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(29876..30253)
DNA (378bp) protein (126aa)
RNP-1 like RNA-binding protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
RNA-binding protein
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_222_21
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

30486..30926
DNA (441bp) protein (147aa)
Transcriptional regulator, Fur family Tax=Geobacter sulfurreducens RepID=D7AFL9_GEOSK
Fur family transcriptional regulator
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_222_22
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30923..32080
DNA (1158bp) protein (386aa)
cytochrome-c peroxidase (EC:1.11.1.5)
Cytochrome-c peroxidase {ECO:0000313|EMBL:CCJ08981.1}; EC=1.11.1.5 {ECO:0000313|EMBL:CCJ08981.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
cytochrome C peroxidase Tax=Methylocystis parvus RepID=UPI00037CBF05
PLM4_65_b1_redo_sep16_scaffold_222_23
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

32080..33156
DNA (1077bp) protein (359aa)
Metallophosphoesterase Tax=Methylobacter tundripaludum SV96 RepID=G3IXD2_9GAMM
Metallophosphoesterase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_222_24
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

33170..33571
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Methylomonas methanica (strain MC09) RepID=G0A7B4_METMM
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_222_25
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(33942..34796)
DNA (855bp) protein (285aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VV0_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:KIJ72329.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_222_26
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(34866..37292)
DNA (2427bp) protein (809aa)
Outer membrane receptor for Fe3+-dicitrate Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGN3_CHLTF
Fe3+-dicitrate outer membrane receptor
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_65_b1_redo_sep16_scaffold_222_27
Paenibacillus sp. oral taxon 786, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

37463..38674
DNA (1212bp) protein (404aa)
4-O-beta-D-mannosyl-D-glucose phosphorylase {ECO:0000256|HAMAP-Rule:MF_00928}; Short=MGP {ECO:0000256|HAMAP-Rule:MF_00928};; Short=Mannosylglucose phosphorylase {ECO:0000256|HAMAP-Rule:MF_00928};; EC=2.4.1.281 {ECO:0000256|HAMAP-Rule:MF_00928};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. oral taxon 786 str. D14.;"
4-O-beta-D-mannosyl-D-glucose phosphorylase Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZH3_9BACL
glycosidase
PLM4_65_b1_redo_sep16_scaffold_222_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

38757..39590
DNA (834bp) protein (278aa)
Sugar phosphate isomerase/epimerase Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CK80_ROBBH
Xylose isomerase domain-containing protein TIM barrel
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AHG89682.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_222_29
unknown

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39666..39782
DNA (117bp) protein (39aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_222_30
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

39782..40387
DNA (606bp) protein (202aa)
putative molybdopterin-guanine dinucleotide biosynthesis protein A Tax=Gemmata obscuriglobus RepID=UPI00016C47B8
molybdopterin-guanine dinucleotide biosynthesis protein MobA
Tax=RBG_16_Planctomycetes_64_12_curated
Displaying items 1-30 of 46 in total

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