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PLM4_65_b1_redo_sep16_scaffold_369

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_369_1
unknown

Not on your lists

2..1765
DNA (1764bp) protein (588aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_369_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

1984..2799
DNA (816bp) protein (272aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028W9_SOLUE
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_369_3
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2793..5414)
DNA (2622bp) protein (874aa)
Secreted protein Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ81_9GAMM
periplasmic component of the Tol biopolymer transport system
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM4_65_b1_redo_sep16_scaffold_369_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

5518..6264
DNA (747bp) protein (249aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_369_5
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

6393..7835
DNA (1443bp) protein (481aa)
Cysteine desulfurase activator complex subunit SufB Tax=Gloeobacter kilaueensis JS1 RepID=U5QGV5_9CYAN
sufB; cysteine desulfurase activator complex subunit SufB
Cysteine desulfurase activator complex subunit SufB {ECO:0000313|EMBL:AGY58176.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
PLM4_65_b1_redo_sep16_scaffold_369_6
unknown

Not on your lists

comp(7838..8917)
DNA (1080bp) protein (360aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_369_7
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8914..9627)
DNA (714bp) protein (238aa)
wzc; non-specific protein-tyrosine kinase (EC:2.7.10.2)
Non-specific protein-tyrosine kinase Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S8Y0_ACTS5
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM4_65_b1_redo_sep16_scaffold_369_8
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9624..11177)
DNA (1554bp) protein (518aa)
Two-component response regulator receiver sensor signal transduction histidine kinase Tax=Micromonospora lupini str. Lupac 08 RepID=I0L2Z2_9ACTO
Two-component response regulator receiver sensor signal transduction histidine kinase {ECO:0000313|EMBL:CCH18189.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
two component system response regulator
PLM4_65_b1_redo_sep16_scaffold_369_9
unknown

Not on your lists

11253..11657
DNA (405bp) protein (135aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_369_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(11581..12060)
DNA (480bp) protein (160aa)
anti-sigma regulatory factor (EC:2.7.11.1)
Anti-sigma regulatory factor (Ser/Thr protein kinase) Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIB6_CHLTF
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_65_b1_redo_sep16_scaffold_369_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

12185..13777
DNA (1593bp) protein (531aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_369_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

13813..14586
DNA (774bp) protein (258aa)
FeS assembly ATPase SufC (EC:3.6.3.27); K09013 Fe-S cluster assembly ATP-binding protein bin=bin9_gal15 species=Nitrosococcus oceani genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
sufC; FeS assembly ATPase SufC
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_369_13
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

14583..15929
DNA (1347bp) protein (449aa)
FeS assembly protein SufD Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U184_MYXSD
FeS assembly protein SufD
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_369_14
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15926..17173
DNA (1248bp) protein (416aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens HK44.;"
bifunctional cysteine desulfurase/selenocysteine lyase Tax=Pseudomonas fluorescens RepID=UPI00031CFAF8
aminotransferase
PLM4_65_b1_redo_sep16_scaffold_369_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

17170..17622
DNA (453bp) protein (151aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIS0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69427.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_369_16
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

17627..18172
DNA (546bp) protein (182aa)
hypothetical protein bin=bin9_gal15 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
FeS assembly SUF system protein SufT
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_369_17
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

18175..18651
DNA (477bp) protein (159aa)
Transcriptional regulator, BadM/Rrf2 family Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01P16_SOLUE
BadM/Rrf2 family transcriptional regulator
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_369_18
unknown

Not on your lists

18887..19189
DNA (303bp) protein (101aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_369_19
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

19349..20383
DNA (1035bp) protein (345aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IGJ0_ANADE
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_369_20
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(20401..21291)
DNA (891bp) protein (297aa)
id=16898817 bin=RBG_16_Aminicenantes_63_16_plus tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
Tax=RBG_16_Aminicenantes_63_16_curated
PLM4_65_b1_redo_sep16_scaffold_369_21
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

21360..23276
DNA (1917bp) protein (639aa)
Uncharacterized protein Tax=Planctomyces maris DSM 8797 RepID=A6C9N8_9PLAN
hypothetical protein
Tax=RBG_16_Planctomycetes_64_10_curated
PLM4_65_b1_redo_sep16_scaffold_369_22
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(23347..23931)
DNA (585bp) protein (195aa)
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
PLM4_65_b1_redo_sep16_scaffold_369_23
unknown

Not on your lists

comp(24271..24450)
DNA (180bp) protein (60aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_369_24
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24447..26510)
DNA (2064bp) protein (688aa)
Carbon starvation protein A Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABB4_GEMAT
carbon starvation protein CstA
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
PLM4_65_b1_redo_sep16_scaffold_369_25
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(26612..27526)
DNA (915bp) protein (305aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_369_26
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27818..29209)
DNA (1392bp) protein (464aa)
Magnesium transporter Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A5G7_STAND
magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
PLM4_65_b1_redo_sep16_scaffold_369_27
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(29211..31694)
DNA (2484bp) protein (828aa)
Serine/threonine-protein kinase Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9V6_ACIC5
serine/threonine protein kinase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_369_28
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

31792..34653
DNA (2862bp) protein (954aa)
hypothetical protein Tax=Nodosilinea nodulosa RepID=UPI0002F5B11D
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_369_29
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(34650..35765)
DNA (1116bp) protein (372aa)
Aminoglycoside phosphotransferase Tax=Opitutaceae bacterium TAV5 RepID=H1J0M1_9BACT
aminoglycoside phosphotransferase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_65_b1_redo_sep16_scaffold_369_30

Not on your lists

comp(35762..36667)
DNA (906bp) protein (302aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003608ED5
Uncharacterized protein {ECO:0000313|EMBL:CBI00015.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
nucleotidyltransferase
Displaying items 1-30 of 37 in total

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