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PLM4_65_b1_redo_sep16_scaffold_685

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_685_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(15..3287)
DNA (3273bp) protein (1091aa)
Heavy metal efflux pump, CzcA family bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
CzcA family heavy metal efflux protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_685_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(3295..4758)
DNA (1464bp) protein (488aa)
Efflux transporter, RND family, MFP subunit Tax=Anaeromyxobacter sp. (strain K) RepID=B4UI22_ANASK
RND family efflux transporter MFP subunit
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_685_3
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4770..6140)
DNA (1371bp) protein (457aa)
Outer membrane efflux protein Tax=Holophaga foetida DSM 6591 RepID=H1P090_9BACT
cation efflux system protein CusC
Cation efflux system protein CusC {ECO:0000313|EMBL:AGC46181.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
PLM4_65_b1_redo_sep16_scaffold_685_4
unknown

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comp(6260..6601)
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z8T2_9BRAD
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_685_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

6677..7462
DNA (786bp) protein (262aa)
Uncharacterized protein Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZQD7_9BACT
fatty acid hydroxylase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_685_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7653..9167
DNA (1515bp) protein (505aa)
hypothetical protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_685_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

9164..10447
DNA (1284bp) protein (428aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEL6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM4_65_b1_redo_sep16_scaffold_685_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

10444..11676
DNA (1233bp) protein (411aa)
Spore coat assembly protein-like protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZB4_SOLUE
spore coat assembly protein-like protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_685_9
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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11729..13252
DNA (1524bp) protein (508aa)
Metallophosphoesterase Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U5Y5_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:KFE63742.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
metallophosphoesterase
PLM4_65_b1_redo_sep16_scaffold_685_10
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13254..13910)
DNA (657bp) protein (219aa)
hypothetical protein; K03975 membrane-associated protein bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
dedA; DedA transmembrane protein
Tax=CG_Desulfob_01
PLM4_65_b1_redo_sep16_scaffold_685_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

14030..14905
DNA (876bp) protein (292aa)
Electron transport protein SCO1/SenC Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM52_KORVE
electron transport protein SCO1/SenC
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_685_12
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14922..16232)
DNA (1311bp) protein (437aa)
Xaa-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000256|SAAS:SAAS00016582}; Short=X-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279};; EC=3.4.13.9 {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000256|SAAS:SAAS00016582};; Imidodipeptidase {ECO:0000256|HAMAP-Rule:MF_01279}; Proline dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
Peptidase M24 Tax=Holophaga foetida DSM 6591 RepID=H1P358_9BACT
proline dipeptidase
PLM4_65_b1_redo_sep16_scaffold_685_13
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

16462..18897
DNA (2436bp) protein (812aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U4L1_MYXSD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_685_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

19051..21201
DNA (2151bp) protein (717aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ABJ85587.1}; EC=2.7.3.- {ECO:0000313|EMBL:ABJ85587.1};; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PAS/PAC sensor hybrid histidine kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XM8_SOLUE
PLM4_65_b1_redo_sep16_scaffold_685_15
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(21186..21665)
DNA (480bp) protein (160aa)
Putative uncharacterized protein Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A4Y0_ALKEH
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_65_b1_redo_sep16_scaffold_685_16
Kytococcus sedentarius, Kytococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21741..22016
DNA (276bp) protein (92aa)
Uncharacterized conserved protein Tax=Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541) RepID=C7NF51_KYTSD
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ACV07304.1}; species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Kytococcus.;" source="Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541); (Micrococcus sedentarius).;"
PLM4_65_b1_redo_sep16_scaffold_685_17
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(21998..23203)
DNA (1206bp) protein (402aa)
glucose/sorbosone dehydrogenase
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Janthinobacterium lividum genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_685_18
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(23200..24036)
DNA (837bp) protein (279aa)
Chlorite dismutase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
heme peroxidase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_685_19
unknown

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comp(24106..24684)
DNA (579bp) protein (193aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_685_20
unknown

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comp(24699..25847)
DNA (1149bp) protein (383aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_685_21
unknown

Not on your lists

comp(25854..26108)
DNA (255bp) protein (85aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_685_22
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

26348..27457
DNA (1110bp) protein (370aa)
Hemolysin D Tax=Sorangium cellulosum So0157-2 RepID=S4XJG6_SORCE
hemolysin D
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_685_23
R_WOR_2_63_39, WOR-2, Bacteria

Not on your lists

27454..30666
DNA (3213bp) protein (1071aa)
acriflavin resistance protein Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B6CA74
acriflavin resistance protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_63_39_curated
PLM4_65_b1_redo_sep16_scaffold_685_24

Not on your lists

30674..31147
DNA (474bp) protein (158aa)
TspO and MBR like protein Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKN55118.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
crtK_[H]; TspO and MBR like protein
PLM4_65_b1_redo_sep16_scaffold_685_25
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31216..35361
DNA (4146bp) protein (1382aa)
Transmembrane efflux protein Tax=Streptomyces zinciresistens K42 RepID=G2GFS3_9ACTO
Transmembrane efflux protein {ECO:0000313|EMBL:EGX57648.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zinciresistens K42.;"
PLM4_65_b1_redo_sep16_scaffold_685_26
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

35484..35960
DNA (477bp) protein (159aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003765560
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_685_27
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(36021..36527)
DNA (507bp) protein (169aa)
Mandelate racemase/muconate lactonizing protein Tax=Fibrisoma limi BUZ 3 RepID=I2GLX4_9BACT
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:CCH54900.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Mandelate racemase/muconate lactonizing protein
Displaying 27 items

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