ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_4405

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_4405_1
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(3..1169)
DNA (1167bp) protein (389aa)
Molybdopterin oxidoreductase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B1B7_HERA2
molybdopterin oxidoreductase
Molybdopterin oxidoreductase {ECO:0000313|EMBL:ABX07304.1}; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
PLM4_65_b1_redo_sep16_scaffold_4405_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(1270..1665)
DNA (396bp) protein (132aa)
acyl-CoA hydrolase (EC:3.1.2.-); K10806 acyl-CoA thioesterase YciA [EC:3.1.2.-] bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
acyl-CoA hydrolase (EC:3.1.2.-)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_65_b1_redo_sep16_scaffold_4405_3
unknown

Not on your lists

comp(1962..2402)
DNA (441bp) protein (147aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_4405_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2451..4160)
DNA (1710bp) protein (570aa)
Peptidase M28 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMF9_KORVE
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:ABF41941.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM4_65_b1_redo_sep16_scaffold_4405_5
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

4455..4994
DNA (540bp) protein (180aa)
RNA-binding protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NKT6_GLOVI
RNA-binding protein
RNA-binding protein {ECO:0000313|EMBL:BAC89332.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
PLM4_65_b1_redo_sep16_scaffold_4405_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5134..5658
DNA (525bp) protein (175aa)
All4737 protein bin=GWC2_Methylomirabilis_70_16 species=Anabaena cylindrica genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_b1_redo_sep16_scaffold_4405_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

5660..7333
DNA (1674bp) protein (558aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4405_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7779..8801)
DNA (1023bp) protein (341aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta Tax=uncultured Acidobacteria bacterium RepID=H5SPR8_9BACT
2-oxoglutarate ferredoxin oxidoreductase subunit beta
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4405_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8798..10669)
DNA (1872bp) protein (624aa)
korA; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4405_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10876..11271
DNA (396bp) protein (132aa)
Putative integron gene cassette protein Tax=uncultured bacterium RepID=B0BH26_9BACT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_65_b1_redo_sep16_scaffold_4405_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

11513..14839
DNA (3327bp) protein (1109aa)
Uncharacterized protein Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KSS1_STRRC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_65_b1_redo_sep16_scaffold_4405_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(14864..15025)
DNA (162bp) protein (54aa)
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying 12 items

View Taxonomy