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PLM4_65_b1_redo_sep16_scaffold_4468

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_4468_1
GWB1_OP11_37_8, Levybacteria, Microgenomates, Bacteria

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1..858
DNA (858bp) protein (286aa)
Major facilitator superfamily MFS_1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDL4_THET1
Major facilitator superfamily {ECO:0000313|EMBL:KKQ42482.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_37_8.;"
major facilitator superfamily protein
PLM4_65_b1_redo_sep16_scaffold_4468_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(989..1729)
DNA (741bp) protein (247aa)
Sec-independent protein translocase protein TatC Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z3R1_DESAF
Sec-independent protein translocase subunit TatC
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4468_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(1749..2132)
DNA (384bp) protein (128aa)
Sec-independent protein translocase protein TatA bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Sec-independent protein secretion pathway component
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4468_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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2176..3459
DNA (1284bp) protein (428aa)
nodulation efficiency protein NfeD; K07403 membrane-bound serine protease (ClpP class) bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
nfeD; membrane-bound serine protease NfeD, long form
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4468_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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3459..4214
DNA (756bp) protein (252aa)
hypothetical protein bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4468_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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4215..5372
DNA (1158bp) protein (386aa)
Putative uncharacterized protein Tax=uncultured bacterium 293 RepID=E3T607_9BACT
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4468_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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5410..6144
DNA (735bp) protein (245aa)
sporulation domain-containing protein bin=CNBR_ACIDO species=Ralstonia pickettii genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_4468_8
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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6146..7063
DNA (918bp) protein (306aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
Lipoyl synthase Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DXW2_THIND
lipA_[H]; Lipoate synthase
PLM4_65_b1_redo_sep16_scaffold_4468_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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7114..8619
DNA (1506bp) protein (502aa)
Apolipoprotein N-acyltransferase Tax=Geobacter sp. (strain M21) RepID=C6E466_GEOSM
lnt; apolipoprotein N-acyltransferase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4468_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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8757..9767
DNA (1011bp) protein (337aa)
peptide chain release factor 2; K02836 peptide chain release factor 2 bin=CNBR_ACIDO species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
prfB; peptide chain release factor 2
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4468_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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9927..10709
DNA (783bp) protein (261aa)
translocation protein TolB Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B5D383
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4468_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(10657..13032)
DNA (2376bp) protein (792aa)
mrcA; penicillin-binding protein 1A (EC:2.4.2.- 3.4.-.-); K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
penicillin-binding protein 1A
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4468_13
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(13096..14916)
DNA (1821bp) protein (607aa)
hypothetical protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying 13 items

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