ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_1421

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_1421_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..325)
DNA (324bp) protein (108aa)
Peptidase M14 carboxypeptidase A Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X6R6_ACISM
peptidase M14 carboxypeptidase A
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_1421_2
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

405..3707
DNA (3303bp) protein (1101aa)
exported protease; K08676 tricorn protease [EC:3.4.21.-] bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
exported tricorn protease
Tax=RBG_16_Aminicenantes_63_16_curated
PLM4_65_b1_redo_sep16_scaffold_1421_3
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3780..8333
DNA (4554bp) protein (1518aa)
ATP dependent helicase, Lhr family Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IJM9_ANADE
ATP dependent helicase, Lhr family {ECO:0000313|EMBL:ABC81862.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
DEAD/DEAH box helicase-like protein
PLM4_65_b1_redo_sep16_scaffold_1421_4
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8335..9660)
DNA (1326bp) protein (442aa)
Acetylornithine aminotransferase bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
4-aminobutyrate aminotransferase family protein
Tax=GWF1_Xanthomonadales_69_6_curated
PLM4_65_b1_redo_sep16_scaffold_1421_5
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9665..11248)
DNA (1584bp) protein (528aa)
Aldehyde dehydrogenase bin=GWF1_Xanthomonadales_69_6 species=Rhodanobacter thiooxydans genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
NAD-dependent aldehyde dehydrogenase
Tax=GWF1_Xanthomonadales_69_6_curated
PLM4_65_b1_redo_sep16_scaffold_1421_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11340..12539
DNA (1200bp) protein (400aa)
Beta-ketoadipyl CoA thiolase Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ74_9GAMM
Beta-ketoadipyl CoA thiolase {ECO:0000313|EMBL:EIL99515.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
3-oxoadipyl-CoA thiolase
PLM4_65_b1_redo_sep16_scaffold_1421_7
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12536..13870
DNA (1335bp) protein (445aa)
Amino acid permease Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=Q9A3S6_CAUCR
basic amino acid/polyamine antiporter (APA) family transporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
PLM4_65_b1_redo_sep16_scaffold_1421_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13867..15378)
DNA (1512bp) protein (504aa)
Arylsulfatase A family protein Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZGD9_TERRK
sulfatase
Sulfatase {ECO:0000313|EMBL:AHG88506.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_1421_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15457..16311
DNA (855bp) protein (285aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000381E738
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABF43066.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM4_65_b1_redo_sep16_scaffold_1421_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(16388..17455)
DNA (1068bp) protein (356aa)
Succinylglutamate desuccinylase/aspartoacylase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01U01_SOLUE
succinylglutamate desuccinylase/aspartoacylase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM4_65_b1_redo_sep16_scaffold_1421_11
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17469..18533)
DNA (1065bp) protein (355aa)
3-oxoacyl-[acyl-carrier-protein] synthase Tax=Sorangium cellulosum (strain So ce56) RepID=A9FLI4_SORC5
3-oxoacyl-[acyl-carrier-protein] synthase, KASIII {ECO:0000313|EMBL:KFE69168.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_1421_12
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

18652..20436
DNA (1785bp) protein (595aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ55_CHLTF
Zn finger domain-containing DnaJ-class molecular chaperone
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:AEP12342.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM4_65_b1_redo_sep16_scaffold_1421_13
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(20467..21513)
DNA (1047bp) protein (349aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1421_14
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(21729..21914)
DNA (186bp) protein (62aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1421_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(21972..22400)
DNA (429bp) protein (143aa)
Putative glutaredoxin-like protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4A9_CALAS
putative glutaredoxin-like protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1421_16
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(22426..23655)
DNA (1230bp) protein (410aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000378B439
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1421_17
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(23652..25253)
DNA (1602bp) protein (534aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IQA9_9PLAN
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1421_18
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(25264..25773)
DNA (510bp) protein (170aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1421_19
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(25783..26421)
DNA (639bp) protein (213aa)
Sensor histidine kinase bin=GWA2_Ignavibacteria_55_11 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
integral membrane sensor signal transduction histidine kinase
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying 19 items

View Taxonomy