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PLM4_65_b1_redo_sep16_scaffold_2166

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2166_1
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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137..1435
DNA (1299bp) protein (433aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003767FBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAC68458.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
PLM4_65_b1_redo_sep16_scaffold_2166_2
unknown

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comp(1641..2195)
DNA (555bp) protein (185aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2166_3
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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comp(2302..3033)
DNA (732bp) protein (244aa)
Glycosyl transferase family 2 bin=GWF2_Lentisphaerae_52_8 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
family 2 glycosyl transferase
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM4_65_b1_redo_sep16_scaffold_2166_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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3063..4946
DNA (1884bp) protein (628aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UHK2_MYXSD
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2166_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

5031..5354
DNA (324bp) protein (108aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2166_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

5360..6382
DNA (1023bp) protein (341aa)
NAD-dependent epimerase/dehydratase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTM4_HALO1
NAD-dependent epimerase/dehydratase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2166_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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6379..7410
DNA (1032bp) protein (344aa)
Acyltransferase Tax=Streptomyces sp. SPB78 RepID=D9ULG3_9ACTO
phospholipid/glycerol acyltransferase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2166_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7407..8597)
DNA (1191bp) protein (397aa)
Putative esterase of the alpha-beta hydrolase superfamily Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH52_CHLTF
putative alpha-beta hydrolase superfamily esterase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2166_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(8654..9088)
DNA (435bp) protein (145aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2166_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(9100..9714)
DNA (615bp) protein (205aa)
Putative transcriptional regulator Tax=uncultured marine bacterium MedDCM-OCT-S11-C310 RepID=D6PE53_9BACT
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2166_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(9794..10024)
DNA (231bp) protein (77aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2166_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(10021..11937)
DNA (1917bp) protein (639aa)
N-acetylmuramoyl-L-alanine amidase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISJ4_KORVE
N-acetylmuramoyl-L-alanine amidase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2166_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(11985..14363)
DNA (2379bp) protein (793aa)
FtsK/SpoIIIE family protein; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA translocase FtsK
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_2166_14
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14371..16011)
DNA (1641bp) protein (547aa)
ribonuclease J Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B3E40E
metallo-beta-lactamase family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_2166_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists


comp(16022..16819)
DNA (798bp) protein (266aa)
dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A bin=GWA2_Methylomirabilis_73_35 species=Frateuria aurantia genus=Frateuria taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2166_16
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

16853..18331
DNA (1479bp) protein (493aa)
Glycogen synthase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=GLGA_ANADF
glycogen/starch synthase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2166_17
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

18393..18719
DNA (327bp) protein (109aa)
Thioredoxin Tax=Idiomarina sp. A28L RepID=F7RXM8_9GAMM
thioredoxin
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2166_18
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18803..19933
DNA (1131bp) protein (377aa)
Filamentation induced by cAMP protein Fic Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QK58_DESB2
filamentation induced by cAMP protein fic
Tax=RBG_16_Gallionellales_57_15_curated
PLM4_65_b1_redo_sep16_scaffold_2166_19
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19969..21549)
DNA (1581bp) protein (527aa)
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase {ECO:0000255|HAMAP-Rule:MF_00577}; Short=Urocanase {ECO:0000255|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000255|HAMAP-Rule:MF_00577};; Imidazolonepropionate hydrolase {ECO:0000255|HAMAP-Rule:MF_00577}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
Urocanate hydratase Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=HUTU_SYMTH
Displaying 19 items

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