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PLM4_65_b1_redo_sep16_scaffold_2615

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2615_1
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..2695)
DNA (2694bp) protein (898aa)
UvrABC system protein A Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JGC9_ANAD2
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
excinuclease ABC subunit A
PLM4_65_b1_redo_sep16_scaffold_2615_2
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2830..3273)
DNA (444bp) protein (148aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000255|HAMAP-Rule:MF_00116}; Short=dUTPase {ECO:0000255|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000255|HAMAP-Rule:MF_00116};; dUTP pyrophosphatase {ECO:0000255|HAMAP-Rule:MF_00116}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
deoxyuridine 5''''-triphosphate nucleotidohydrolase Tax=Nitrospina RepID=UPI00037CB7AB
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
PLM4_65_b1_redo_sep16_scaffold_2615_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

3337..4428
DNA (1092bp) protein (364aa)
pyruvate formate lyase activating enzyme 2 (yfgB) bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_2615_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

4569..6152
DNA (1584bp) protein (528aa)
hypothetical protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_2615_5
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(6176..7453)
DNA (1278bp) protein (426aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Glutamate-1-semialdehyde 2,1-aminomutase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEH3_CHLTF
PLM4_65_b1_redo_sep16_scaffold_2615_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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7520..7765
DNA (246bp) protein (82aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_2615_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7762..8154
DNA (393bp) protein (131aa)
Death-on-curing family protein Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GUR4_9CYAN
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_2615_8
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(8160..9071)
DNA (912bp) protein (304aa)
hemB; Delta-aminolevulinic acid dehydratase (porphobilinogen synthase) (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKG7_9BACT
Tax=CG_Arma_02
PLM4_65_b1_redo_sep16_scaffold_2615_trna_1
unknown

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9670..9743
DNA (74bp)
transferRNA Met
PLM4_65_b1_redo_sep16_scaffold_2615_9
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9774..10808
DNA (1035bp) protein (345aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 /; 2st14).;"
tRNA(Ile)-lysidine synthase Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QEZ7_DESB2
tRNA(Ile)-lysidine synthetase
PLM4_65_b1_redo_sep16_scaffold_2615_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

10805..11365
DNA (561bp) protein (187aa)
Hypoxanthine phosphoribosyltransferase Tax=Lachnospiraceae bacterium 28-4 RepID=R9J676_9FIRM
Hpt; hypoxanthine-guanine phosphoribosyltransferase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2615_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

11440..13347
DNA (1908bp) protein (636aa)
ftsH; ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH Tax=uncultured Acidobacteriales bacterium HF0200_23L05 RepID=E0XUI3_9BACT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM4_65_b1_redo_sep16_scaffold_2615_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

13371..14240
DNA (870bp) protein (290aa)
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IHZ0_ANADE
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2615_13
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

14237..15064
DNA (828bp) protein (276aa)
hypothetical protein bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
membrane protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2615_14
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

15061..15984
DNA (924bp) protein (308aa)
hypothetical protein bin=CNBR_ACIDO species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM4_65_b1_redo_sep16_scaffold_2615_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

15981..17357
DNA (1377bp) protein (459aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase Tax=Sorangium cellulosum (strain So ce56) RepID=GLMM_SORC5
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2615_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

17453..19057
DNA (1605bp) protein (535aa)
Npr Tax=Paenibacillus mucilaginosus (strain KNP414) RepID=F8FGY4_PAEMK
npr; hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_2615_17
unknown

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19068..19589
DNA (522bp) protein (174aa)

This feature has no annotations

Displaying 18 items

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