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PLM4_65_b1_redo_sep16_scaffold_11076

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_11076_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(96..485)
DNA (390bp) protein (130aa)
Response regulator receiver sensor signal transduction histidine kinase bin=GWF2_Bacteroidetes_41_31 species=Clostridium beijerinckii genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
response regulator receiver protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_11076_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(550..1149)
DNA (600bp) protein (200aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_11076_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(1179..1799)
DNA (621bp) protein (207aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00036D9E7D
Na-Ca exchanger/integrin-beta4
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_11076_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(1880..2518)
DNA (639bp) protein (213aa)
hypothetical protein Tax=Ralstonia solanacearum RepID=UPI0001816E94
autotransporter-associated beta strand repeat protein, putative
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_11076_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(2574..3746)
DNA (1173bp) protein (391aa)
Lipid-A-disaccharide synthase Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ATF1_PELPD
lpxB; lipid-A-disaccharide synthase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_11076_6
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3751..4356)
DNA (606bp) protein (202aa)
Conserved hypothetical integral membrane protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEW1_ANADF
hypothetical protein
Conserved hypothetical integral membrane protein {ECO:0000313|EMBL:ABS27257.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM4_65_b1_redo_sep16_scaffold_11076_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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4661..5710
DNA (1050bp) protein (350aa)
Putative uncharacterized protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_11076_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(5714..6790)
DNA (1077bp) protein (359aa)
Penicillin-binding protein, transpeptidase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AJ0_SOLUE
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:CDM66376.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
penicillin-binding protein, transpeptidase
PLM4_65_b1_redo_sep16_scaffold_11076_9
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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6850..8301
DNA (1452bp) protein (484aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA54002.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
hypothetical protein bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_11076_10
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8303..8575
DNA (273bp) protein (91aa)
transcriptional regulator Tax=Thiomicrospira halophila RepID=UPI00036BAF15
Transcriptional regulator HU subunit alpha {ECO:0000313|EMBL:KDN95119.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
histone-like DNA-binding protein
PLM4_65_b1_redo_sep16_scaffold_11076_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(8572..9315)
DNA (744bp) protein (248aa)
carboxyl-terminal protease (EC:3.4.21.102)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000370977E
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying 11 items

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