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PLM4_65_b1_sep16_Acidobacteria_71_15

PLM4_65cm_b1_redo_sep2016_Acidobacteria_71_15
In projects: PLM4_65cm_b1_redo_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p  |  Acidobacteria_All

Consensus taxonomy: Acidobacteria  →  Bacteria

Displaying items 1-50 of 402 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_65_b1_redo_sep16_scaffold_109754
Species: R_Acidobacteria_68_18 (50%)
2 2556 bp 64.55 11.62 99.06
PLM4_65_b1_redo_sep16_scaffold_52881
Species: R_Acidobacteria_65_29 (100%)
4 3935 bp 65.41 10.67 92.78
PLM4_65_b1_redo_sep16_scaffold_50660
Phylum: Proteobacteria (50%)
4 4036 bp 65.41 12.49 76.93
PLM4_65_b1_redo_sep16_scaffold_26024
Domain: Bacteria (100%)
6 5858 bp 66.11 13.34 92.03
PLM4_65_b1_redo_sep16_scaffold_63991
Species: RBG_16_Acidobacteria_70_10_curated (100%)
2 3520 bp 66.28 21.01 99.72
PLM4_65_b1_redo_sep16_scaffold_100512
Species: Candidatus Solibacter usitatus (100%)
2 2697 bp 66.33 11.23 84.65
PLM4_65_b1_redo_sep16_scaffold_64767
Domain: Bacteria (100%)
3 4087 bp 66.33 21.07 86.84
PLM4_65_b1_redo_sep16_scaffold_241278
Species: RBG_16_Acidobacteria_70_10_curated (80%)
5 2667 bp 66.37 18.28 82.00
PLM4_65_b1_redo_sep16_scaffold_43358
Phylum: Acidobacteria (100%)
4 4415 bp 66.82 20.96 96.90
PLM4_65_b1_redo_sep16_scaffold_44053
Domain: Bacteria (85.71%)
7 7817 bp 66.89 15.27 93.57
PLM4_65_b1_redo_sep16_scaffold_16214
Phylum: Acidobacteria (50%)
8 9041 bp 67.20 15.11 92.45
PLM4_65_b1_redo_sep16_scaffold_36645
Domain: Bacteria (100%)
4 4856 bp 67.30 14.36 90.69
PLM4_65_b1_redo_sep16_scaffold_68201
Phylum: Acidobacteria (50%)
8 5718 bp 67.30 14.61 84.58
PLM4_65_b1_redo_sep16_scaffold_100160
Domain: Bacteria (75%)
8 4845 bp 67.33 19.91 99.57
PLM4_65_b1_redo_sep16_scaffold_6092
Domain: Bacteria (73.33%)
15 12693 bp 67.45 13.74 87.95
PLM4_65_b1_redo_sep16_scaffold_22278
Species: RBG_16_Acidobacteria_70_10_curated (66.67%)
3 6386 bp 67.57 12.28 99.31
PLM4_65_b1_redo_sep16_scaffold_74825
Species: RBG_16_Acidobacteria_70_10_curated (71.43%)
7 3212 bp 67.65 16.30 94.15
PLM4_65_b1_redo_sep16_scaffold_10347
Domain: Bacteria (100%)
10 18125 bp 67.69 16.35 94.51
PLM4_65_b1_redo_sep16_scaffold_17233
Species: RBG_16_Acidobacteria_70_10_curated (90%)
10 7341 bp 67.70 13.87 96.61
PLM4_65_b1_redo_sep16_scaffold_41208
Domain: Bacteria (66.67%)
9 6584 bp 67.76 12.17 82.88
PLM4_65_b1_redo_sep16_scaffold_35806
Domain: Bacteria (100%)
5 4920 bp 67.93 17.53 91.83
PLM4_65_b1_redo_sep16_scaffold_78679
Species: RBG_16_Acidobacteria_70_10_curated (50%)
6 3554 bp 68.06 18.19 75.13
PLM4_65_b1_redo_sep16_scaffold_110810
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (50%)
2 2542 bp 68.06 12.92 99.13
PLM4_65_b1_redo_sep16_scaffold_25181
Species: RBG_16_Acidobacteria_70_10_curated (60%)
10 6334 bp 68.12 15.54 83.31
PLM4_65_b1_redo_sep16_scaffold_9742
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (62.5%)
8 9962 bp 68.12 12.90 95.04
PLM4_65_b1_redo_sep16_scaffold_59031
Domain: Bacteria (100%)
4 3687 bp 68.16 12.41 91.46
PLM4_65_b1_redo_sep16_scaffold_5317
Phylum: Acidobacteria (50%)
22 27075 bp 68.19 15.91 91.44
PLM4_65_b1_redo_sep16_scaffold_6423
Domain: Bacteria (91.67%)
12 12345 bp 68.22 14.06 90.98
PLM4_65_b1_redo_sep16_scaffold_33963
Class: Planctomycetia (50%)
6 5068 bp 68.25 15.18 91.10
PLM4_65_b1_redo_sep16_scaffold_43865
Species: RBG_16_Acidobacteria_70_10_curated (80%)
5 4385 bp 68.26 15.05 89.97
PLM4_65_b1_redo_sep16_scaffold_79070
Species: RBG_16_Acidobacteria_70_10_curated (100%)
3 3110 bp 68.26 15.77 96.85
PLM4_65_b1_redo_sep16_scaffold_24246
Phylum: Proteobacteria (50%)
4 6087 bp 68.34 16.41 86.89
PLM4_65_b1_redo_sep16_scaffold_45965
Phylum: Acidobacteria (100%)
7 6916 bp 68.39 13.38 88.23
PLM4_65_b1_redo_sep16_scaffold_54321
Domain: Bacteria (80%)
5 5391 bp 68.43 14.33 89.59
PLM4_65_b1_redo_sep16_scaffold_13713
Species: RBG_16_Acidobacteria_70_10_curated (55.56%)
9 10659 bp 68.43 17.21 93.47
PLM4_65_b1_redo_sep16_scaffold_32470
Phylum: Acidobacteria (50%)
4 5192 bp 68.45 14.39 94.99
PLM4_65_b1_redo_sep16_scaffold_47575
Species: RBG_16_Acidobacteria_70_10_curated (100%)
3 4184 bp 68.48 17.60 94.14
PLM4_65_b1_redo_sep16_scaffold_89651
Domain: Bacteria (50%)
4 2885 bp 68.67 11.28 89.01
PLM4_65_b1_redo_sep16_scaffold_26758
Domain: Bacteria (100%)
5 5769 bp 68.69 16.67 89.70
PLM4_65_b1_redo_sep16_scaffold_27509
Species: RBG_16_Acidobacteria_70_10_curated (57.14%)
7 5680 bp 68.71 16.40 94.91
PLM4_65_b1_redo_sep16_scaffold_3731
Species: RBG_16_Acidobacteria_70_10_curated (88.89%)
27 16317 bp 68.76 18.80 96.47
PLM4_65_b1_redo_sep16_scaffold_13889
Phylum: Acidobacteria (66.67%)
6 8626 bp 68.76 19.75 95.26
PLM4_65_b1_redo_sep16_scaffold_1490
Domain: Bacteria (100%)
17 25725 bp 68.82 15.76 94.25
PLM4_65_b1_redo_sep16_scaffold_13657
Phylum: Acidobacteria (66.67%)
15 14953 bp 68.86 16.15 89.68
PLM4_65_b1_redo_sep16_scaffold_18617
Phylum: Acidobacteria (71.43%)
7 7047 bp 68.88 16.65 93.53
PLM4_65_b1_redo_sep16_scaffold_68510
Phylum: Acidobacteria (80%)
5 3383 bp 68.96 15.08 100.30
PLM4_65_b1_redo_sep16_scaffold_13581
Phylum: Acidobacteria (71.43%)
7 8356 bp 68.97 15.58 93.67
PLM4_65_b1_redo_sep16_scaffold_44787
Species: RBG_16_Acidobacteria_70_10_curated (75%)
4 4331 bp 68.97 15.83 93.72
PLM4_65_b1_redo_sep16_scaffold_81333
Phylum: Acidobacteria (100%)
3 3058 bp 68.97 14.37 91.33
PLM4_65_b1_redo_sep16_scaffold_13963
Phylum: Acidobacteria (57.14%)
7 10547 bp 69.01 14.76 97.08
Displaying items 1-50 of 402 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.