ggKbase home page

ERMGT266_2_curated_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 91 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT266_2_curated_scaffold_12_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2..856)
DNA (855bp) protein (285aa)
Amino acid transporter n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9U4_SINAD
Amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3) {ECO:0000313|EMBL:CDM66820.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
amino acid transporter
ERMGT266_2_curated_scaffold_12_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1081..2313
DNA (1233bp) protein (411aa)
Type II secretory pathway, component PulF n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGS9_CHLTF
Type II secretory pathway, component PulF {ECO:0000313|EMBL:CDM66481.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
type II secretory pathway subunit PulF
ERMGT266_2_curated_scaffold_12_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2389..4116
DNA (1728bp) protein (576aa)
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGT0_CHLTF
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB {ECO:0000313|EMBL:CDM66480.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
ERMGT266_2_curated_scaffold_12_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

4377..7127
DNA (2751bp) protein (917aa)
Type II secretory pathway, component PulD n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGT1_CHLTF
Type II secretory pathway, component PulD {ECO:0000313|EMBL:CDM66479.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
type II secretory pathway subunit PulD
ERMGT266_2_curated_scaffold_12_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

7127..7897
DNA (771bp) protein (257aa)
Type II secretory pathway, pseudopilin PulG {ECO:0000313|EMBL:CDM66478.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative secretion protein; K02456 general secretion pathway protein G id=24408278 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
secretion protein
ERMGT266_2_curated_scaffold_12_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

7887..8360
DNA (474bp) protein (158aa)
General secretion pathway protein G n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ50_KORVE
Type II secretion system protein G (GspG) {ECO:0000313|EMBL:CDM66477.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
general secretion pathway protein G
ERMGT266_2_curated_scaffold_12_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

8454..9395
DNA (942bp) protein (314aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM66476.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Putative uncharacterized protein id=3638897 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
ERMGT266_2_curated_scaffold_12_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

9487..10089
DNA (603bp) protein (201aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB78_GEMAT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
RNA polymerase ECF-type sigma factor
ERMGT266_2_curated_scaffold_12_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

10154..10741
DNA (588bp) protein (196aa)
Putative zinc-finger {ECO:0000313|EMBL:CDM66474.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ERMGT266_2_curated_scaffold_12_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

10762..11748
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI0003808310
Uncharacterized protein {ECO:0000313|EMBL:CDM66473.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
ERMGT266_2_curated_scaffold_12_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

11801..12379
DNA (579bp) protein (193aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAK5_9BACT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CDM64367.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
RNA polymerase sigma-H factor (Sigma-30)
ERMGT266_2_curated_scaffold_12_12
unknown

Not on your lists

12493..12921
DNA (429bp) protein (143aa)

This feature has no annotations

ERMGT266_2_curated_scaffold_12_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

12918..13310
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN88_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDM64369.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
ERMGT266_2_curated_scaffold_12_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

13464..14714
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKS3_KORVE
Uncharacterized protein {ECO:0000313|EMBL:CDM66300.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
ERMGT266_2_curated_scaffold_12_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14820..17948
DNA (3129bp) protein (1043aa)
Cna protein B-type domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJJ4_CHLTF
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:CDM66299.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Cna protein B-type domain-containing protein
ERMGT266_2_curated_scaffold_12_16
unknown

Not on your lists

18017..18775
DNA (759bp) protein (253aa)

This feature has no annotations

ERMGT266_2_curated_scaffold_12_17

Not on your lists

19077..21134
DNA (2058bp) protein (686aa)
Gll0604 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NN10_GLOVI
Uncharacterized protein {ECO:0000313|EMBL:AIA11589.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ERMGT266_2_curated_scaffold_12_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(21489..23411)
DNA (1923bp) protein (641aa)
Tetratricopeptide TPR_2 n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q118M3_TRIEI
Sigma-54 interacting regulator {ECO:0000313|EMBL:CDM66090.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
ERMGT266_2_curated_scaffold_12_19
unknown

Not on your lists

23571..23831
DNA (261bp) protein (87aa)

This feature has no annotations

ERMGT266_2_curated_scaffold_12_20
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(24241..26595)
DNA (2355bp) protein (785aa)
Uncharacterized protein n=1 Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8GTZ5_DEIGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD26635.1}; TaxID=745776 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 /; I-0).;"
ERMGT266_2_curated_scaffold_12_21
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26592..32312)
DNA (5721bp) protein (1907aa)
Conserved repeat domain protein id=4646697 bin=GWC2_Geobacteraceae_55_20 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWC2_Geobacteraceae_55_20_curated
ERMGT266_2_curated_scaffold_12_22
Pseudanabaena biceps, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(32349..34412)
DNA (2064bp) protein (688aa)
Uncharacterized protein n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8N1V2_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ELS33686.1}; Flags: Precursor;; TaxID=927668 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena biceps PCC 7429.;"
hypothetical protein
ERMGT266_2_curated_scaffold_12_23
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(34504..35022)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI00024837D7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW29694.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017).;"
ERMGT266_2_curated_scaffold_12_24
unknown

Not on your lists

35270..35425
DNA (156bp) protein (52aa)

This feature has no annotations

ERMGT266_2_curated_scaffold_12_25
CSP1_5_NC10, NC10, Bacteria

Not on your lists

35531..40048
DNA (4518bp) protein (1506aa)
hypothetical protein id=14431129 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
ERMGT266_2_curated_scaffold_12_26
unknown

Not on your lists

40087..40248
DNA (162bp) protein (54aa)

This feature has no annotations

ERMGT266_2_curated_scaffold_12_27
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(40174..41610)
DNA (1437bp) protein (479aa)
Fis family transcriptional regulator; K02481 two-component system, NtrC family, response regulator id=14625085 bin=bin7_NC10_sister species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Fis family transcriptional regulator
Tax=CSP1_6_Rokubacteria
ERMGT266_2_curated_scaffold_12_28
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(41727..43715)
DNA (1989bp) protein (663aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] id=14424771 bin=bin1_lowGC species=Leptospira fainei genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
ERMGT266_2_curated_scaffold_12_29
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

43966..45129
DNA (1164bp) protein (388aa)
SAM-dependent methyltransferase {ECO:0000313|EMBL:CDM66869.1}; EC=2.1.1.- {ECO:0000313|EMBL:CDM66869.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YF11_9DELT
SAM-dependent methyltransferase
ERMGT266_2_curated_scaffold_12_30
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(45209..48316)
DNA (3108bp) protein (1036aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022C2_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying items 1-30 of 91 in total

View Taxonomy