ggKbase home page

ERMGT266_2_curated_scaffold_19

Search features with annotation key words

Displaying items 1-30 of 88 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT266_2_curated_scaffold_19_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1..1104)
DNA (1104bp) protein (368aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=DNLJ_SOLUE
ERMGT266_2_curated_scaffold_19_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1237..2019)
DNA (783bp) protein (261aa)
GCN5-related N-acetyltransferase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V0U3_TERSS
Uncharacterized protein {ECO:0000313|EMBL:CDM66395.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
N-acetyltransferase GCN5
ERMGT266_2_curated_scaffold_19_3
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2012..2845)
DNA (834bp) protein (278aa)
two component system sensor histidine kinase, hybrid (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656, ECO:0000313|EMBL:CCK81084.1};; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source="Desulfobacula toluolica (strain DSM 7467 / Tol2).;"
Two component system sensor histidine kinase, hybrid n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NAK5_DESTT
ERMGT266_2_curated_scaffold_19_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2850..4238)
DNA (1389bp) protein (463aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM64527.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ERMGT266_2_curated_scaffold_19_5

Not on your lists

comp(4377..5111)
DNA (735bp) protein (245aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK94861.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ERMGT266_2_curated_scaffold_19_6
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5175..5705)
DNA (531bp) protein (177aa)
Thioredoxin family homolog n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F873_ACIC5
hypothetical protein
Thioredoxin family homolog {ECO:0000313|EMBL:ACO31468.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
ERMGT266_2_curated_scaffold_19_7
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5761..6687)
DNA (927bp) protein (309aa)
TPR repeat-containing protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TH78_9CYAN
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:AFY81753.1}; Flags: Precursor;; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
ERMGT266_2_curated_scaffold_19_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

6794..10009
DNA (3216bp) protein (1072aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF07_CHLTF
ERMGT266_2_curated_scaffold_19_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

10025..10444
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P937_9BACT
Predicted CoA-binding protein {ECO:0000313|EMBL:CDM64460.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
yccU; hypothetical protein
ERMGT266_2_curated_scaffold_19_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

10614..11108
DNA (495bp) protein (165aa)
Molybdopterin adenylyltransferase {ECO:0000313|EMBL:CDM64457.1}; EC=2.7.7.75 {ECO:0000313|EMBL:CDM64457.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Molybdenum cofactor synthesis domain protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GH94_9FIRM
molybdenum cofactor synthesis domain-containing protein
ERMGT266_2_curated_scaffold_19_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11446..12183
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003709B83
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41130.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
ERMGT266_2_curated_scaffold_19_12
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

12385..12762
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B6M3_TURPD
hypothetical protein
Tax=RBG_16_Acidobacteria_68_9_curated
ERMGT266_2_curated_scaffold_19_13
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

12831..13016
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI00036AE4C4
WD repeat-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
ERMGT266_2_curated_scaffold_19_14
unknown

Not on your lists

13013..13195
DNA (183bp) protein (61aa)

This feature has no annotations

ERMGT266_2_curated_scaffold_19_15
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

13223..13636
DNA (414bp) protein (138aa)
NADH dehydrogenase subunit A (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
NADH-quinone oxidoreductase subunit A n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGA7_CHLTF
ERMGT266_2_curated_scaffold_19_16
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

13749..14381
DNA (633bp) protein (211aa)
NADH dehydrogenase subunit B (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
NADH-quinone oxidoreductase subunit B n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGA6_CHLTF
ERMGT266_2_curated_scaffold_19_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14512..15132
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIK7_KORVE
YMGG-like Gly-zipper {ECO:0000313|EMBL:CDM66019.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
ERMGT266_2_curated_scaffold_19_18
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

15320..15805
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11X79_CYTH3
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
ERMGT266_2_curated_scaffold_19_19
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(15824..17863)
DNA (2040bp) protein (680aa)
Tetratricopeptide TPR_4 n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QRM8_METTR
GTP cyclohydrolase III (methanopterin)
Tax=RBG_13_Nitrospirae_41_22_curated
ERMGT266_2_curated_scaffold_19_20
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(17863..18708)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QRM7_METTR
hypothetical protein
Tax=RBG_13_Nitrospirae_41_22_curated
ERMGT266_2_curated_scaffold_19_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

18957..21557
DNA (2601bp) protein (867aa)
Aminopeptidase N {ECO:0000313|EMBL:CDM65114.1}; EC=3.4.11.2 {ECO:0000313|EMBL:CDM65114.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Membrane alanyl aminopeptidase id=1250356 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
aminopeptidase N
ERMGT266_2_curated_scaffold_19_22
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

21835..22572
DNA (738bp) protein (246aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XPL5_9BACT
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EHO39936.1}; Flags: Precursor;; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
drrA; response regulator DrrA
ERMGT266_2_curated_scaffold_19_23
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

22700..24436
DNA (1737bp) protein (579aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000344C83E
PBS lyase HEAT domain protein {ECO:0000313|EMBL:EKF04173.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
HEAT repeat-containing protein
ERMGT266_2_curated_scaffold_19_24
Eimeria mitis, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

24469..26196
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Eimeria mitis RepID=U6JVL4_9EIME
PBS lyase HEAT domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:CDJ27558.1}; TaxID=44415 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria mitis.;"
ERMGT266_2_curated_scaffold_19_25
Leishmania mexicana, Leishmania, Kinetoplastida, Eukaryota

Not on your lists

26193..28511
DNA (2319bp) protein (773aa)
Uncharacterized protein n=1 Tax=Leishmania mexicana (strain MHOM/GT/2001/U1103) RepID=E9AM68_LEIMU
Uncharacterized protein {ECO:0000313|EMBL:CBZ24023.1}; TaxID=929439 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania.;" source="Leishmania mexicana (strain MHOM/GT/2001/U1103).;"
DnaJ domain-containing protein
ERMGT266_2_curated_scaffold_19_26
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(28528..28848)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TS1_METBU
transcriptional modulator of MazE/toxin, MazF
Uncharacterized protein {ECO:0000313|EMBL:ABE53155.1}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 /; ACE-M).;"
ERMGT266_2_curated_scaffold_19_27
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28833..29027)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XYY8_STAC7
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_61_14_curated
ERMGT266_2_curated_scaffold_19_28
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

29147..31135
DNA (1989bp) protein (663aa)
UvrABC system protein B n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH67_CHLTF
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
excinuclease ABC subunit B
ERMGT266_2_curated_scaffold_19_29
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

31258..32793
DNA (1536bp) protein (512aa)
D-lactate dehydrogenase (Cytochrome) n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QX64_CHLT3
FAD-linked oxidase {ECO:0000313|EMBL:KER09596.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
D-lactate dehydrogenase
ERMGT266_2_curated_scaffold_19_30
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

32809..33978
DNA (1170bp) protein (390aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDZ6_CHLTF
Displaying items 1-30 of 88 in total

View Taxonomy