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ERMGT266_2_curated_scaffold_28

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Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT266_2_curated_scaffold_28_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(2..115)
DNA (114bp) protein (38aa)
tuf; elongation factor Tu (EC:3.6.5.3)
elongation factor Tu n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B2EC04
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
ERMGT266_2_curated_scaffold_28_trna_4
unknown

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comp(183..254)
DNA (72bp)
transferRNA Thr
ERMGT266_2_curated_scaffold_28_trna_3
unknown

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comp(287..359)
DNA (73bp)
transferRNA Gly
ERMGT266_2_curated_scaffold_28_trna_2
unknown

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comp(409..495)
DNA (87bp)
transferRNA Tyr
ERMGT266_2_curated_scaffold_28_trna_1
unknown

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comp(837..909)
DNA (73bp)
transferRNA Thr
ERMGT266_2_curated_scaffold_28_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


1151..1606
DNA (456bp) protein (152aa)
50S ribosomal protein L13 n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=RL13_ACIC5
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rplM; 50S ribosomal protein L13
ERMGT266_2_curated_scaffold_28_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1632..2024
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGN9_CHLTF
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
30S ribosomal protein S9
ERMGT266_2_curated_scaffold_28_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2144..3163
DNA (1020bp) protein (340aa)
30S ribosomal protein S2 n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X096_ACISM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
30S ribosomal protein S2
ERMGT266_2_curated_scaffold_28_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3326..3991
DNA (666bp) protein (222aa)
Elongation factor Ts n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KNR8_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
translation elongation factor Ts
ERMGT266_2_curated_scaffold_28_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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4139..4888
DNA (750bp) protein (250aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
pyrH; uridylate kinase
Uridylate kinase id=4843833 bin=GWC2_Nitrospirae_57_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
ERMGT266_2_curated_scaffold_28_7
unknown

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comp(4711..5073)
DNA (363bp) protein (121aa)

This feature has no annotations

ERMGT266_2_curated_scaffold_28_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5105..5665
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AL4_SOLUE
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ribosome recycling factor
ERMGT266_2_curated_scaffold_28_9
unknown

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5668..5790
DNA (123bp) protein (41aa)

This feature has no annotations

ERMGT266_2_curated_scaffold_28_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5836..7911
DNA (2076bp) protein (692aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4D6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDM65585.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
ERMGT266_2_curated_scaffold_28_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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7880..9745
DNA (1866bp) protein (622aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F63_METBF
TIGR03663 family protein {ECO:0000313|EMBL:CDM65584.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
ERMGT266_2_curated_scaffold_28_12
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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9837..10130
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000347FD0C
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
ERMGT266_2_curated_scaffold_28_13
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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10111..10401
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LAP1_9CYAN
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
ERMGT266_2_curated_scaffold_28_14
unknown

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10398..10622
DNA (225bp) protein (75aa)

This feature has no annotations

ERMGT266_2_curated_scaffold_28_15
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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10660..11655
DNA (996bp) protein (332aa)
UniRef90_D6U5B8 Molybdopterin dehydrogenase FAD-binding n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5B8_9CHLR id=1247860 bin=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
ERMGT266_2_curated_scaffold_28_16
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11652..12035
DNA (384bp) protein (128aa)
Lactoylglutathione lyase family protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KRQ9_SOLCM
lactoylglutathione lyase family protein
Lactoylglutathione lyase family protein {ECO:0000313|EMBL:AFD07640.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
ERMGT266_2_curated_scaffold_28_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

12008..12805
DNA (798bp) protein (266aa)
Uncharacterized MobA-like protein {ECO:0000313|EMBL:CDM65152.1}; EC=2.7.7.76 {ECO:0000313|EMBL:CDM65152.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
4-diphosphocytidyl-2C-methyl-D-erythritol synthase; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] id=24457121 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
metal dependent phosphohydrolase
ERMGT266_2_curated_scaffold_28_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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12937..13458
DNA (522bp) protein (174aa)
Probable thioredoxin n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NQ83_CHRVO
Peroxiredoxin {ECO:0000313|EMBL:CDM65140.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
thioredoxin
ERMGT266_2_curated_scaffold_28_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(13563..14138)
DNA (576bp) protein (192aa)
Maf-like protein AciX8_0031 n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NXP6_GRAMM
Maf-like protein PYK22_01676 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
maf protein
ERMGT266_2_curated_scaffold_28_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14370..14837
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGH5_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM65672.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
ERMGT266_2_curated_scaffold_28_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14851..15150
DNA (300bp) protein (100aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] id=719978 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
glutamyl-tRNA(Gln) amidotransferase subunit C
ERMGT266_2_curated_scaffold_28_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15154..16629
DNA (1476bp) protein (492aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120, ECO:0000256|SAAS:SAAS00013872};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GATA_KORVE
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
ERMGT266_2_curated_scaffold_28_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(16740..17360)
DNA (621bp) protein (207aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65617.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ERMGT266_2_curated_scaffold_28_24
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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17432..18796
DNA (1365bp) protein (455aa)
outer membrane protein; K07277 outer membrane protein id=12554247 bin=CNBR_ACIDO species=Rhodopirellula sallentina genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
ERMGT266_2_curated_scaffold_28_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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18854..19900
DNA (1047bp) protein (349aa)
Putative hydrolase of the alpha/beta-hydrolase fold family n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK02_CHLTF
Predicted hydrolase of the alpha/beta-hydrolase fold {ECO:0000313|EMBL:CDM65615.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative alpha/beta-hydrolase fold family hydrolase
ERMGT266_2_curated_scaffold_28_26
unknown

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20368..20556
DNA (189bp) protein (63aa)

This feature has no annotations

Displaying items 1-30 of 42 in total

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