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ERMLT700_curated_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 192 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT700_curated_scaffold_9_1
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..106
-----------------
DNA (105bp)
protein (35aa)
UPI0003CE2C66 related cluster n=1 Tax=unknown RepID=UPI0003CE2C66
Integrase {ECO:0000313|EMBL:ESY69670.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
Putative transposase
ERMLT700_curated_scaffold_9_2
unknown

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249..938
-----------------
DNA (690bp)
protein (230aa)

This feature has no annotations

ERMLT700_curated_scaffold_9_3
unknown

Not on your lists

975..1253
-----------------
DNA (279bp)
protein (93aa)

This feature has no annotations

ERMLT700_curated_scaffold_9_4
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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1362..3578
-----------------
DNA (2217bp)
protein (739aa)
phage/plasmid primase, P4 family; K06919 putative DNA primase/helicase id=12555855 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative DNA primase/helicase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
ERMLT700_curated_scaffold_9_5
unknown

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3711..4295
-----------------
DNA (585bp)
protein (195aa)

This feature has no annotations

ERMLT700_curated_scaffold_9_6
unknown

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4300..4542
-----------------
DNA (243bp)
protein (81aa)

This feature has no annotations

ERMLT700_curated_scaffold_9_7
unknown

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4560..5273
-----------------
DNA (714bp)
protein (238aa)

This feature has no annotations

ERMLT700_curated_scaffold_9_8
unknown

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5275..6942
-----------------
DNA (1668bp)
protein (556aa)

This feature has no annotations

ERMLT700_curated_scaffold_9_9
unknown

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6939..7154
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

ERMLT700_curated_scaffold_9_10
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

7161..7340
-----------------
DNA (180bp)
protein (60aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
ERMLT700_curated_scaffold_9_11
unknown

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7603..7785
-----------------
DNA (183bp)
protein (61aa)

This feature has no annotations

ERMLT700_curated_scaffold_9_12

Not on your lists

7782..8066
-----------------
DNA (285bp)
protein (95aa)
Resolvase, Holliday junction-type n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CQW6_DESK7
Uncharacterized protein {ECO:0000313|EMBL:KKL53681.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
resolvase, Holliday junction-type
ERMLT700_curated_scaffold_9_13
unknown

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8363..8581
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

ERMLT700_curated_scaffold_9_14
unknown

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8578..9078
-----------------
DNA (501bp)
protein (167aa)

This feature has no annotations

ERMLT700_curated_scaffold_9_15
unknown

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9075..9440
-----------------
DNA (366bp)
protein (122aa)

This feature has no annotations

ERMLT700_curated_scaffold_9_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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9440..10648
-----------------
DNA (1209bp)
protein (403aa)
phage integrase family protein id=12554990 bin=CNBR_ACIDO species=Desulfococcus multivorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phage integrase protein (DNA breaking and rejoining enzyme)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_9_trna_3
unknown

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comp(10659..10729)
-----------------
DNA (71bp)
transferRNA Cys
ERMLT700_curated_scaffold_9_trna_2
unknown

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comp(10792..10863)
-----------------
DNA (72bp)
transferRNA Gly
ERMLT700_curated_scaffold_9_17
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(11087..12088)
-----------------
DNA (1002bp)
protein (334aa)
Galactose-1-phosphate uridylyltransferase id=3905296 bin=GWA2_OP3_52_12 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
galactose-1-phosphate uridylyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_9_18
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(12170..12538)
-----------------
DNA (369bp)
protein (123aa)
hypothetical protein; K07460 putative endonuclease id=12554255 bin=CNBR_ACIDO species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_9_19
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(12719..13852)
-----------------
DNA (1134bp)
protein (378aa)
Acetylornithine aminotransferase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NSU7_GRAMM
Acetylornithine transaminase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_9_20
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(14041..15456)
-----------------
DNA (1416bp)
protein (472aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] id=12556855 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cysteinyl-tRNA synthetase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_9_21
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(15476..16414)
-----------------
DNA (939bp)
protein (313aa)
ribF; riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] id=12556853 bin=CNBR_ACIDO species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
riboflavin biosynthesis protein RibF
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_9_22
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(16419..17204)
-----------------
DNA (786bp)
protein (262aa)
beta-lactamase domain-containing protein; K06167 PhnP protein id=12556852 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
beta-lactamase superfamily metal-dependent hydrolase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_9_23
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(17278..17601)
-----------------
DNA (324bp)
protein (108aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z3H9_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_9_24
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

17702..18529
-----------------
DNA (828bp)
protein (276aa)
MazG family protein; K04765 ATP diphosphatase [EC:3.6.1.8] id=12556851 bin=CNBR_ACIDO species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
MazG family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_9_25
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(18565..19020)
-----------------
DNA (456bp)
protein (152aa)
Uncharacterized protein n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VU40_9CYAN
GxxExxY protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_9_26
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(19102..21624)
-----------------
DNA (2523bp)
protein (841aa)
ComE-like competence protein; K02238 competence protein ComEC id=12556850 bin=CNBR_ACIDO species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Metallo-beta-lactamase superfamily
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_9_27
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(21965..22645)
-----------------
DNA (681bp)
protein (227aa)
Putative hydroxylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAH1_GEMAT
putative hydroxylase
Putative hydroxylase {ECO:0000313|EMBL:BAH39769.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
ERMLT700_curated_scaffold_9_28
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22664..25198)
-----------------
DNA (2535bp)
protein (845aa)
putative outer membrane porin protein, ferrisiderophore receptor n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746140
TonB-denpendent receptor {ECO:0000313|EMBL:ERL02813.1}; TaxID=1299319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida LF54.;"
TonB-dependent siderophore receptor
Displaying items 1-30 of 192 in total

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