ggKbase home page

ERMLT700_curated_scaffold_690

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT700_curated_scaffold_690_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2..256
-----------------
DNA (255bp)
protein (85aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024N0_SOLUE
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_690_2

Not on your lists

347..1042
-----------------
DNA (696bp)
protein (232aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BLR3 RepID=C0IN65_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACN58751.1}; TaxID=506521 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR3.;"
SMP-30/Gluconolaconase/LRE-like region-containing protein
ERMLT700_curated_scaffold_690_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(1089..1658)
-----------------
DNA (570bp)
protein (190aa)
Cytochrome c class I n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JVS0_HYPDA
cytochrome C class I
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_690_4
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(1630..2874)
-----------------
DNA (1245bp)
protein (415aa)
Sulfite oxidase-like oxidoreductase n=1 Tax=Herbaspirillum sp. CF444 RepID=J2LZK3_9BURK
oxidoreductase, molybdopterin binding
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_690_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2983..4038)
-----------------
DNA (1056bp)
protein (352aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Pseudomonas sp. K-62 RepID=I2FFY7_9PSED
YVTN beta-propeller repeat-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_690_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(4067..4558)
-----------------
DNA (492bp)
protein (164aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_690_7

Not on your lists

4723..5739
-----------------
DNA (1017bp)
protein (339aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium CSLG10 RepID=G4WV63_9BACT
Marine sediment metagenome DNA, contig: S01H4_S00066 {ECO:0000313|EMBL:GAG81390.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
ERMLT700_curated_scaffold_690_8
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5759..7846
-----------------
DNA (2088bp)
protein (696aa)
Uncharacterized protein n=3 Tax=Sutterella RepID=R5PZ92_9BURK
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
ERMLT700_curated_scaffold_690_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

7848..8600
-----------------
DNA (753bp)
protein (251aa)
hypothetical protein n=1 Tax=Desulfitobacterium sp. PCE1 RepID=UPI0003707649
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_690_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(8674..9312)
-----------------
DNA (639bp)
protein (213aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003612C2E
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
ERMLT700_curated_scaffold_690_11
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9559..11148
-----------------
DNA (1590bp)
protein (530aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YHS9_9DELT
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
integral membrane protein MviN
ERMLT700_curated_scaffold_690_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(11422..11775)
-----------------
DNA (354bp)
protein (118aa)
RNA-binding protein with RRM domain
RNP-1 like RNA-binding protein id=12554823 bin=CNBR_ACIDO species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMLT700_curated_scaffold_690_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(11956..13458)
-----------------
DNA (1503bp)
protein (501aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037A130D
radical SAM protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_690_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(13590..14996)
-----------------
DNA (1407bp)
protein (469aa)
rnb; exoribonuclease II (EC:3.1.13.1)
Putative exoribonuclease II {ECO:0000313|EMBL:CBE67911.1}; EC=3.1.13.1 {ECO:0000313|EMBL:CBE67911.1};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative exoribonuclease II n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM25_9BACT
ERMLT700_curated_scaffold_690_15
unknown

Not on your lists

15032..15292
-----------------
DNA (261bp)
protein (87aa)

This feature has no annotations

ERMLT700_curated_scaffold_690_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

15280..15762
-----------------
DNA (483bp)
protein (161aa)
Thioredoxin n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJW5_9BACT
thioredoxin
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_690_17
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15855..16442
-----------------
DNA (588bp)
protein (196aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HRN4_CYAP4
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ACL45901.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
ERMLT700_curated_scaffold_690_18
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(16466..17944)
-----------------
DNA (1479bp)
protein (493aa)
Putative glycine betaine/carnitine/choline ABC transporter (Permease and substrate binding protein) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH20_9BACT
glycine betaine/carnitine/choline ABC transporter (permease and substrate binding protein)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_690_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(17992..18789)
-----------------
DNA (798bp)
protein (266aa)
Glycine betaine/carnitine/choline ABC transporter (ATP-binding protein) (EC:3.6.3.-)
Putative Glycine betaine/carnitine/choline ABC transporter (ATP-binding protein) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH21_9BACT
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_690_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18916..19833
-----------------
DNA (918bp)
protein (306aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP55_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01247.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
ERMLT700_curated_scaffold_690_21

Not on your lists

19830..20690
-----------------
DNA (861bp)
protein (287aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein n=1 Tax=uncultured bacterium CSLG7 RepID=G4WV40_9BACT
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein {ECO:0000313|EMBL:AEQ20292.1}; TaxID=1091577 species="Bacteria; environmental samples.;" source="uncultured bacterium CSLG7.;"
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein
ERMLT700_curated_scaffold_690_22
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

20817..21086
-----------------
DNA (270bp)
protein (90aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_690_23
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(21199..21774)
-----------------
DNA (576bp)
protein (192aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0KA06_SACES
hypothetical protein
Tax=RBG_16_RIF_CHLX_70_13_curated
ERMLT700_curated_scaffold_690_24
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21827..22207
-----------------
DNA (381bp)
protein (127aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WDB7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EIZ78188.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
hypothetical protein
ERMLT700_curated_scaffold_690_25
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

22217..22990
-----------------
DNA (774bp)
protein (258aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B72E54
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
ERMLT700_curated_scaffold_690_26
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23353..24240
-----------------
DNA (888bp)
protein (296aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XM20_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK33899.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
ERMLT700_curated_scaffold_690_27

Not on your lists

24314..24523
-----------------
DNA (210bp)
protein (70aa)
Marine sediment metagenome DNA, contig: S06H3_C03632 {ECO:0000313|EMBL:GAI09645.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ERMLT700_curated_scaffold_690_trna_1
unknown

Not on your lists

24554..24627
-----------------
DNA (74bp)
transferRNA Arg
ERMLT700_curated_scaffold_690_28
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(24881..26017)
-----------------
DNA (1137bp)
protein (379aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C758_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ39704.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
ERMLT700_curated_scaffold_690_29
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26330..26788
-----------------
DNA (459bp)
protein (153aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J3DG85_9BURK
isoprenylcysteine carboxyl methyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
Displaying items 1-30 of 37 in total

View Taxonomy