ggKbase home page

SR2-18-B1_coassembly_150211

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-B1_coassembly_150211_16S_1
unknown

Not on your lists

comp(2..609)
-----------------
DNA (608bp)
16S ribosomal RNA (16S rRNA)
SR2-18-B1_coassembly_150211_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

1139..2542
-----------------
DNA (1404bp)
protein (468aa)
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6)
Undecaprenyl-phosphate galactose phosphotransferase {ECO:0000313|EMBL:ABJ88199.1}; EC=2.7.8.6 {ECO:0000313|EMBL:ABJ88199.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Undecaprenyl-phosphate galactose phosphotransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Q71_SOLUE
SR2-18-B1_coassembly_150211_2
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2522..3223)
-----------------
DNA (702bp)
protein (234aa)
methyltransferase type 11 id=12554474 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Methyltransferase domain protein {ECO:0000313|EMBL:EFK09683.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
methyltransferase type 11
SR2-18-B1_coassembly_150211_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(3379..3750)
-----------------
DNA (372bp)
protein (124aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TJ5_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ87025.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_150211_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(3797..6922)
-----------------
DNA (3126bp)
protein (1042aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02DC2_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ82298.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_150211_5
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6981..8330
-----------------
DNA (1350bp)
protein (450aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZQ1_9PLAN
Neutral/alkaline non-lysosomal ceramidase
Tax=RBG_13_Bacteroidetes_42_15_curated
SR2-18-B1_coassembly_150211_6
unknown

Not on your lists

8348..9520
-----------------
DNA (1173bp)
protein (391aa)

This feature has no annotations

SR2-18-B1_coassembly_150211_7
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9543..10388
-----------------
DNA (846bp)
protein (282aa)
gmuE; putative mannose kinase GmuE (EC:2.7.1.4)
Fructokinase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9R890_9DELT
Fructokinase {ECO:0000313|EMBL:EPX65313.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
SR2-18-B1_coassembly_150211_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

10506..11123
-----------------
DNA (618bp)
protein (206aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Orotate phosphoribosyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Q72_SOLUE
phosphoribosyltransferase
SR2-18-B1_coassembly_150211_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(11137..13875)
-----------------
DNA (2739bp)
protein (913aa)
CoA-binding domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CN5_SOLUE
CoA-binding domain protein {ECO:0000313|EMBL:ABJ81181.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
CoA-binding domain-containing protein
SR2-18-B1_coassembly_150211_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(13971..15143)
-----------------
DNA (1173bp)
protein (391aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B424C8
neuraminidase (sialidase)-like protein
Neuraminidase (Sialidase)-like protein {ECO:0000313|EMBL:ABJ83647.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_150211_11
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15148..17232)
-----------------
DNA (2085bp)
protein (695aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000374721D
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
SR2-18-B1_coassembly_150211_12
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17233..20187)
-----------------
DNA (2955bp)
protein (985aa)
Glycoside hydrolase family 2 sugar binding protein n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QN82_METS6
lacZ; glycoside hydrolase family 2 sugar-binding protein
Glycoside hydrolase family 2 sugar binding {ECO:0000313|EMBL:ACT49260.1}; Flags: Precursor;; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
Displaying 13 items

View Taxonomy