ggKbase home page

SR2-18-B1_coassembly_153617

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-B1_coassembly_153617_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

1..495
-----------------
DNA (495bp)
protein (165aa)
Uncharacterised conserved protein UCP033563 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01W72_SOLUE
hypothetical protein
Uncharacterised conserved protein UCP033563 {ECO:0000313|EMBL:ABJ86093.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_153617_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(504..1916)
-----------------
DNA (1413bp)
protein (471aa)
Arylsulfatase A family protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFD8_SINAD
arylsulfatase A family protein
Arylsulfatase A family protein {ECO:0000313|EMBL:AGA28099.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SR2-18-B1_coassembly_153617_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(1954..2496)
-----------------
DNA (543bp)
protein (181aa)
DinB family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020S2_SOLUE
DinB family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
SR2-18-B1_coassembly_153617_4
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(2518..5118)
-----------------
DNA (2601bp)
protein (867aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZY38_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB76187.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SR2-18-B1_coassembly_153617_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

5386..6651
-----------------
DNA (1266bp)
protein (422aa)
Nodulation efficiency protein NfeD n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028R2_SOLUE
nodulation efficiency protein NfeD
Nodulation efficiency protein NfeD {ECO:0000313|EMBL:ABJ82490.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_153617_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

6662..7432
-----------------
DNA (771bp)
protein (257aa)
SPFH domain, Band 7 family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028R1_SOLUE
hypothetical protein
SPFH domain, Band 7 family protein {ECO:0000313|EMBL:ABJ82491.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_153617_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

7443..8054
-----------------
DNA (612bp)
protein (204aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024M5_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83551.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_153617_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

8079..9296
-----------------
DNA (1218bp)
protein (406aa)
Oxidoreductase domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020K4_SOLUE
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABJ84649.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_153617_9
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

9318..10142
-----------------
DNA (825bp)
protein (275aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00037A676D
hypothetical protein
Tax=Caldatribacterium californiense
SR2-18-B1_coassembly_153617_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10135..11610
-----------------
DNA (1476bp)
protein (492aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DSI5_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA31351.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SR2-18-B1_coassembly_153617_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(11617..12894)
-----------------
DNA (1278bp)
protein (426aa)
Trigger factor {ECO:0000255|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000255|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000255|HAMAP-Rule:MF_00303};; PPIase {ECO:0000255|HAMAP-Rule:MF_00303}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Trigger factor n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=TIG_SOLUE
trigger factor
SR2-18-B1_coassembly_153617_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(13016..14206)
-----------------
DNA (1191bp)
protein (397aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
S-adenosylmethionine synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VU0_SOLUE
SR2-18-B1_coassembly_153617_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14421..14798
-----------------
DNA (378bp)
protein (126aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035FC136
TonB-like protein
Outer membrane transport energization protein TonB {ECO:0000313|EMBL:ABF42134.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
SR2-18-B1_coassembly_153617_14
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(14840..15292)
-----------------
DNA (453bp)
protein (151aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003686004
heat shock protein Hsp20
Tax=GWF2_Verrucomicrobia_62_7_curated
SR2-18-B1_coassembly_153617_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists


comp(15495..15959)
-----------------
DNA (465bp)
protein (155aa)
50S ribosomal protein L17 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL17_SOLUE
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000255|HAMAP-Rule:MF_01368}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_153617_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(15993..17021)
-----------------
DNA (1029bp)
protein (343aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RPOA_SOLUE
SR2-18-B1_coassembly_153617_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists


comp(17034..17618)
-----------------
DNA (585bp)
protein (195aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000370C300
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_153617_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists


comp(17908..18315)
-----------------
DNA (408bp)
protein (136aa)
30S ribosomal protein S11 n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000367E825
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000255|HAMAP-Rule:MF_01310}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_153617_19
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists


comp(18346..18729)
-----------------
DNA (384bp)
protein (128aa)
30S ribosomal protein S13 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RS13_SOLUE
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_153617_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(18748..18861)
-----------------
DNA (114bp)
protein (38aa)
50S ribosomal protein L36 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL36_SOLUE
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000255|HAMAP-Rule:MF_00251}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_153617_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(19118..19888)
-----------------
DNA (771bp)
protein (257aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Methionine aminopeptidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WB4_SOLUE
SR2-18-B1_coassembly_153617_22
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(19885..20556)
-----------------
DNA (672bp)
protein (224aa)
adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036A28AF
Displaying 22 items

View Taxonomy