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SR2-18-B1_coassembly_457077

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-B1_coassembly_457077_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(827..1192)
-----------------
DNA (366bp)
protein (122aa)
Putative uncharacterized protein n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0THH8_HELMI id=5223270 bin=16ft_combo_ws3_JS1 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
SR2-18-B1_coassembly_457077_2
unknown

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comp(1238..1507)
-----------------
DNA (270bp)
protein (90aa)

This feature has no annotations

SR2-18-B1_coassembly_457077_trna_1
unknown

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comp(1691..1765)
-----------------
DNA (75bp)
transferRNA Pro
SR2-18-B1_coassembly_457077_3
RLO_RIF02_62_27, RIF2, Bacteria

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1867..2751
-----------------
DNA (885bp)
protein (295aa)
2,3-dimethylmalate lyase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EDE9_AMICL
2,3-dimethylmalate lyase
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
SR2-18-B1_coassembly_457077_4
RBG_13_WOR_3_43_14_curated, WOR-3, Bacteria

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2742..3992
-----------------
DNA (1251bp)
protein (417aa)
3-isopropylmalate dehydratase large subunit n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TBD6_9EURY
LeuC_1; 3-isopropylmalate dehydratase large subunit
Tax=RBG_13_WOR_3_43_14_curated
SR2-18-B1_coassembly_457077_5
Thermovibrio ammonificans, Thermovibrio, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

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3985..4497
-----------------
DNA (513bp)
protein (171aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=648996 species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Thermovibrio.;" source="Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1).;"
3-isopropylmalate dehydratase small subunit n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T4Q8_THEA1
3-isopropylmalate dehydratase, small subunit
SR2-18-B1_coassembly_457077_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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4511..5620
-----------------
DNA (1110bp)
protein (370aa)
Isocitrate/isopropylmalate dehydrogenase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WJP3_9EURY id=5224460 bin=16ft_combo_ws3_JS1 species=Thermoplasmatales archaeon SCGC AB-539-C06 genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
isocitrate/isopropylmalate dehydrogenase
Tax=RBG_16_RIF_WS3X_71_46_curated
SR2-18-B1_coassembly_457077_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5617..5994
-----------------
DNA (378bp)
protein (126aa)
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
SR2-18-B1_coassembly_457077_8
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5996..6196)
-----------------
DNA (201bp)
protein (67aa)
Extracellular metalloprotease SMAC_06893 {ECO:0000313|EMBL:CCH74109.1}; EC=3.4.24.- {ECO:0000313|EMBL:CCH74109.1};; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
Metalloprotease MEP1-like protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MUR5_CORCM
metalloprotease MEP1-like protein
Displaying 9 items

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