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FFV18_Bp1_scaffold_836137

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFV18_Bp1_scaffold_836137_1
Gossypium raimondii, Gossypium, Malvales, rosids, Streptophyta, Viridiplantae

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comp(1..918)
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Oryza sativa subsp. japonica RepID=A3BK86_ORYSJ
Uncharacterized protein {ECO:0000313|EMBL:KJB21095.1}; TaxID=29730 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.;" source="Gossypium raimondii (New World cotton).;"
FFV18_Bp1_scaffold_836137_2
unknown

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comp(1025..4939)
DNA (3915bp) protein (1305aa)

This feature has no annotations

FFV18_Bp1_scaffold_836137_3
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(5627..7192)
DNA (1566bp) protein (522aa)
Peptidase M16 domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEV8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KDA53464.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
FFV18_Bp1_scaffold_836137_4
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(7198..8931)
DNA (1734bp) protein (578aa)
Peptidase M16 domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFB9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KDA53463.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
FFV18_Bp1_scaffold_836137_5
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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9345..9947
DNA (603bp) protein (201aa)
colicin V production protein; K03558 membrane protein required for colicin V production id=24507469 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
FFV18_Bp1_scaffold_836137_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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9950..10183
DNA (234bp) protein (78aa)
Response regulator receiver protein n=1 Tax=mine drainage metagenome RepID=E6QIM1_9ZZZZ
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
FFV18_Bp1_scaffold_836137_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

10699..11604
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SG89_THEM7
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
FFV18_Bp1_scaffold_836137_8
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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11748..15344
DNA (3597bp) protein (1199aa)
Chromosome partition protein Smc n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFV1_9BACT
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
FFV18_Bp1_scaffold_836137_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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15407..16300
DNA (894bp) protein (298aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] id=14627693 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
FFV18_Bp1_scaffold_836137_10
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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16693..19008
DNA (2316bp) protein (772aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GA24_GEOUR
Tax=CG_Desulfob_01
FFV18_Bp1_scaffold_836137_11
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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19832..21226
DNA (1395bp) protein (465aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRV4_KORVE
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
FFV18_Bp1_scaffold_836137_12
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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21707..22177
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK28_KORVE
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
FFV18_Bp1_scaffold_836137_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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22268..22720
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI0003759007
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:CDM65570.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
FFV18_Bp1_scaffold_836137_14
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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22895..25111
DNA (2217bp) protein (739aa)
Putative uncharacterized protein id=4383725 bin=GWF2_Syntrophobacterales_56_9 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=CG_Syntroph_01
FFV18_Bp1_scaffold_836137_15
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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25074..26801
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IR68_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB64213.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
FFV18_Bp1_scaffold_836137_16
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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26886..30002
DNA (3117bp) protein (1039aa)
Spermine/spermidine synthase family protein id=4154700 bin=GWC2_Ignavibacteria_56_12 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
FFV18_Bp1_scaffold_836137_17
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30394..30987)
DNA (594bp) protein (198aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:AKF08265.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
FFV18_Bp1_scaffold_836137_18
unknown

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comp(31048..32049)
DNA (1002bp) protein (334aa)

This feature has no annotations

Displaying 18 items

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