ggKbase home page

S2-16-all-fractions_k255_3037249

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S2-16-all-fractions_k255_3037249_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(80..253)
DNA (174bp) protein (58aa)
id=12555135 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S2-16-all-fractions_k255_3037249_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(261..620)
DNA (360bp) protein (120aa)
hypothetical protein id=12555134 bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S2-16-all-fractions_k255_3037249_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(668..1174)
DNA (507bp) protein (169aa)
hypothetical protein id=12555133 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_3037249_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1257..2255)
DNA (999bp) protein (333aa)
von Willebrand factor A id=12556695 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Mg-chelatase subunit ChlD
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_3037249_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(2351..3286)
DNA (936bp) protein (312aa)
adoK; adenosine kinase (EC:2.7.1.20); K00856 adenosine kinase [EC:2.7.1.20] id=12555132 bin=CNBR_ACIDO species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
adoK; adenosine kinase (EC:2.7.1.20)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_3037249_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3402..4262)
DNA (861bp) protein (287aa)
methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] id=12555131 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
methylthioadenosine phosphorylase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S2-16-all-fractions_k255_3037249_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(4342..5229)
DNA (888bp) protein (296aa)
hypothetical protein id=12555130 bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S2-16-all-fractions_k255_3037249_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(5192..6199)
DNA (1008bp) protein (336aa)
Lysine/arginine/ornithine transport system kinase n=1 Tax=Thermococcus sp. CL1 RepID=I3ZVS3_9EURY
lysine/arginine/ornithine transport system kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_3037249_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(6199..7338)
DNA (1140bp) protein (380aa)
Putative acyl-CoA dehydrogenase n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2Z7_9BACT
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_3037249_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7407..7967
DNA (561bp) protein (187aa)
id=12555128 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S2-16-all-fractions_k255_3037249_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8036..8647)
DNA (612bp) protein (204aa)
id=12555127 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S2-16-all-fractions_k255_3037249_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(8714..9832)
DNA (1119bp) protein (373aa)
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] id=12555125 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_3037249_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(9937..10800)
DNA (864bp) protein (288aa)
DNA replication protein, DNAC-like; K02315 DNA replication protein DnaC id=12555124 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA replication protein, DNAC-like
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S2-16-all-fractions_k255_3037249_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(10978..11442)
DNA (465bp) protein (155aa)
MerR family transcriptional regulator; K13640 MerR family transcriptional regulator, heat shock protein HspR id=12555123 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
MerR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_3037249_15
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(11442..12566)
DNA (1125bp) protein (375aa)
dnaJ1; chaperone protein DnaJ; K03686 molecular chaperone DnaJ id=12555122 bin=CNBR_ACIDO species=Corynebacterium ulceribovis genus=Corynebacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
chaperone protein DnaJ
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S2-16-all-fractions_k255_3037249_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(12615..14546)
DNA (1932bp) protein (644aa)
chaperone protein DnaK id=12555121 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dnaK; molecular chaperone DnaK
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_3037249_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

14794..16848
DNA (2055bp) protein (685aa)
FecR protein id=12555120 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_3037249_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

16881..19256
DNA (2376bp) protein (792aa)
id=12555964 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
penicillin-binding protein 1A
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S2-16-all-fractions_k255_3037249_19
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19306..19779)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GMA3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH55030.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
S2-16-all-fractions_k255_3037249_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(19809..20267)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035C7403
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:EDY16057.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cupin
S2-16-all-fractions_k255_3037249_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(20314..21336)
DNA (1023bp) protein (341aa)
peptide chain release factor 2; K02836 peptide chain release factor 2 id=12555965 bin=CNBR_ACIDO species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptide chain release factor 2 (bRF-2)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S2-16-all-fractions_k255_3037249_22
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(21491..23029)
DNA (1539bp) protein (513aa)
lnt; apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] id=12555966 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
acyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S2-16-all-fractions_k255_3037249_23
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(23056..23811)
DNA (756bp) protein (252aa)
sporulation domain-containing protein id=12555967 bin=CNBR_ACIDO species=Ralstonia pickettii genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cell division protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S2-16-all-fractions_k255_3037249_24
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(23866..25359)
DNA (1494bp) protein (498aa)
hypothetical protein id=12555968 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Displaying 24 items

View Taxonomy