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S2-16-all-fractions_k255_4005820

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S2-16-all-fractions_k255_4005820_1
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(1..1467)
DNA (1467bp) protein (489aa)
Phosphoesterase family n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDU9_CHLTF
phosphoesterase family
Phosphoesterase family {ECO:0000313|EMBL:AEP12957.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
S2-16-all-fractions_k255_4005820_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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1537..3783
DNA (2247bp) protein (749aa)
TonB-dependent receptor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INW6_KORVE
TonB-dependent receptor
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S2-16-all-fractions_k255_4005820_3
unknown

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comp(3994..4407)
DNA (414bp) protein (138aa)

This feature has no annotations

S2-16-all-fractions_k255_4005820_4
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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4619..6655
DNA (2037bp) protein (679aa)
TonB-dependent receptor id=3018610 bin=GWF2_Syntrophobacterales_56_9 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
ligand-gated porin
Tax=RBG_13_Nitrospirae_43_8_curated
S2-16-all-fractions_k255_4005820_5
RLO_PLX_64_10, Bacteria

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6643..7257
DNA (615bp) protein (205aa)
Uncharacterized protein id=3018606 bin=GWF2_Syntrophobacterales_56_9 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
putative transmembrane protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
S2-16-all-fractions_k255_4005820_6
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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7254..9110
DNA (1857bp) protein (619aa)
Putative Histidine kinase id=4165963 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pleD; diguanylate cyclase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
S2-16-all-fractions_k255_4005820_7
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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9248..10357
DNA (1110bp) protein (370aa)
Uncharacterized protein id=12556909 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
S2-16-all-fractions_k255_4005820_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

10383..11423
DNA (1041bp) protein (347aa)
ABC transporter, periplasmic phosphate binding protein id=12556908 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter periplasmic phosphate binding protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S2-16-all-fractions_k255_4005820_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

11431..12384
DNA (954bp) protein (318aa)
phosphate ABC transporter inner membrane protein; K02037 phosphate transport system permease protein id=12556907 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphate ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S2-16-all-fractions_k255_4005820_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

12381..13232
DNA (852bp) protein (284aa)
pstA; phosphate ABC transporter permease PstA; K02038 phosphate transport system permease protein id=12556906 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphate ABC transporter, permease protein PstA
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S2-16-all-fractions_k255_4005820_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

13318..13935
DNA (618bp) protein (206aa)
hypothetical protein; K07220 hypothetical protein id=12555366 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_4005820_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

13942..14949
DNA (1008bp) protein (336aa)
phosphate transporter; K03306 inorganic phosphate transporter, PiT family id=12555365 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphate transporter
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_4005820_13
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(14953..15855)
DNA (903bp) protein (301aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-); K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] id=12555364 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying 13 items

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