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14_1009_05_40cm_scaffold_60

Search features with annotation key words

Displaying items 1-30 of 84 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_05_40cm_scaffold_60_1
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(209..565)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035C3308
Amidohydrolase {ECO:0000313|EMBL:AHM63003.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
amidohydrolase family protein
14_1009_05_40cm_scaffold_60_2
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

936..1451
DNA (516bp) protein (172aa)
Translation initiation factor IF-3 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITT2_KORVE
translation initiation factor 3
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
14_1009_05_40cm_scaffold_60_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists


1611..1832
DNA (222bp) protein (74aa)
50S ribosomal protein L35 n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G4V8_9DELT
50S ribosomal protein L35
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_05_40cm_scaffold_60_4
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


2199..2579
DNA (381bp) protein (127aa)
50S ribosomal protein L20 n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037A0BED
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
14_1009_05_40cm_scaffold_60_5
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists


2784..3890
DNA (1107bp) protein (369aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F7U6_ACIC5
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
14_1009_05_40cm_scaffold_60_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

3949..4722
DNA (774bp) protein (258aa)
methylase id=14425357 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
methylase
Tax=CSP1_2_Dadabacteria
14_1009_05_40cm_scaffold_60_7
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists


4785..6896
DNA (2112bp) protein (704aa)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITS7_KORVE
phenylalanyl-tRNA synthetase subunit beta
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
14_1009_05_40cm_scaffold_60_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

7031..7321
DNA (291bp) protein (97aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG38_CHLTF
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
14_1009_05_40cm_scaffold_60_9
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(7494..8465)
DNA (972bp) protein (324aa)
aldo/keto reductase id=4794477 bin=GWC2_Bacteroidetes_40_22 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
aldo/keto reductase
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
14_1009_05_40cm_scaffold_60_10
unknown

Not on your lists

comp(8494..9192)
DNA (699bp) protein (233aa)

This feature has no annotations

14_1009_05_40cm_scaffold_60_11
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(9285..10169)
DNA (885bp) protein (295aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
14_1009_05_40cm_scaffold_60_12
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

10439..11023
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037DFAE8
type 11 methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
14_1009_05_40cm_scaffold_60_13
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11265..11786)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036B40BC
DinB family protein
DinB family protein {ECO:0000313|EMBL:AEU37672.1}; Flags: Precursor;; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
14_1009_05_40cm_scaffold_60_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(11926..12702)
DNA (777bp) protein (259aa)
Cyclase family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTV9_9CHLR
putative cyclase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_1009_05_40cm_scaffold_60_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12769..13347)
DNA (579bp) protein (193aa)
Thiamine pyrophosphate protein domain protein TPP-binding n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTW0_9CHLR
Thiamine pyrophosphate TPP-binding domain-containing protein {ECO:0000313|EMBL:AHG88070.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative phosphonopyruvate decarboxylase
14_1009_05_40cm_scaffold_60_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13347..13859)
DNA (513bp) protein (171aa)
Sulfopyruvate decarboxylase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTW1_9CHLR
Thiamine pyrophosphate TPP-binding domain-containing protein {ECO:0000313|EMBL:AHG88071.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative phosphonopyruvate decarboxylase
14_1009_05_40cm_scaffold_60_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14091..14963
DNA (873bp) protein (291aa)
Xylose isomerase-like TIM barrel n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUW2_KORVE
xylose isomerase
Xylose isomerase-like TIM barrel {ECO:0000313|EMBL:ABF39338.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_1009_05_40cm_scaffold_60_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15017..15610
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003603D76
DinB-like domain protein {ECO:0000313|EMBL:AHG88849.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
14_1009_05_40cm_scaffold_60_19
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(15673..16569)
DNA (897bp) protein (299aa)
ABC-3 protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AU0_SOLUE
ABC-3 protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
14_1009_05_40cm_scaffold_60_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(16588..17523)
DNA (936bp) protein (312aa)
Periplasmic solute binding protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AU1_SOLUE
periplasmic solute binding protein
Periplasmic solute binding protein {ECO:0000313|EMBL:ABJ81825.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_1009_05_40cm_scaffold_60_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(17569..18969)
DNA (1401bp) protein (467aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AU2_SOLUE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABJ81824.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_1009_05_40cm_scaffold_60_22
unknown

Not on your lists

19440..19739
DNA (300bp) protein (100aa)

This feature has no annotations

14_1009_05_40cm_scaffold_60_23
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

19865..22528
DNA (2664bp) protein (888aa)
TonB-dependent receptor plug n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X003_ACISM
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADW68899.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
14_1009_05_40cm_scaffold_60_24
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(22616..23851)
DNA (1236bp) protein (412aa)
TPR repeat protein n=1 Tax=Koribacter versatilis (strain Ellin345) PF7_KORVE">RepID=Q1IPF7_KORVE
hypothetical protein
TPR repeat protein {ECO:0000313|EMBL:ABF41243.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_1009_05_40cm_scaffold_60_25
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

24239..25042
DNA (804bp) protein (268aa)
Ser/Thr protein phosphatase; K09769 hypothetical protein id=12557828 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
14_1009_05_40cm_scaffold_60_26
unknown

Not on your lists

25106..26125
DNA (1020bp) protein (340aa)

This feature has no annotations

14_1009_05_40cm_scaffold_60_27
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

26528..27886
DNA (1359bp) protein (453aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVU4_KORVE
chromosome replication initiator DnaA
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_1009_05_40cm_scaffold_60_28
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

28498..29610
DNA (1113bp) protein (371aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
DNA polymerase III subunit beta n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVU3_KORVE
DNA polymerase III subunit beta
14_1009_05_40cm_scaffold_60_29
RLO_PLX_64_10, Bacteria

Not on your lists

29973..31079
DNA (1107bp) protein (369aa)
DNA methylase N-4/N-6 domain-containing protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8YZU5_XANCT
DNA methylase N-4/N-6 domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
14_1009_05_40cm_scaffold_60_30
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

32058..34469
DNA (2412bp) protein (804aa)
DNA gyrase subunit B (EC:5.99.1.3) rbh
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003744FD1 rbh
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Displaying items 1-30 of 84 in total

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