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AR_MS4_05142019_scaffold_1214

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR_MS4_05142019_scaffold_1214_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2..1009
DNA (1008bp) protein (336aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00217838}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00217866};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Gamma-glutamyl phosphate reductase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9X9N4_9BACT
gamma-glutamyl phosphate reductase
AR_MS4_05142019_scaffold_1214_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1027..2358
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9X9N3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63277.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
AR_MS4_05142019_scaffold_1214_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2361..2987
DNA (627bp) protein (209aa)
Multiple antibiotic resistance (MarC)-related protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPN0_9BACT
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
AR_MS4_05142019_scaffold_1214_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2999..3679
DNA (681bp) protein (227aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XP94_9BACT
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
AR_MS4_05142019_scaffold_1214_5
RLO_RIF_OD1_11_47_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

3995..5140
DNA (1146bp) protein (382aa)
non-specific serine/threonine protein kinase (EC:2.7.11.1)
Sulphatase-modifying factor protein id=3838441 bin=GWF2_Lentisphaerae_57_35 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_47_20_curated
AR_MS4_05142019_scaffold_1214_6
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

6050..7561
DNA (1512bp) protein (504aa)
hypothetical protein BACCOPRO_03189 id=3650912 bin=GWA2_Ignavibacteriae_54_16_partial species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
ferredoxin
Tax=GWA2_Ignavibacteria_54_16_curated
AR_MS4_05142019_scaffold_1214_7
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

7800..8579
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI00037D93AB
serine/threonine protein kinase
Tax=BJP_IG2102_BRC1_58_13
AR_MS4_05142019_scaffold_1214_8
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

8576..9637
DNA (1062bp) protein (354aa)
Type IV pilus retraction protein PilT id=3730157 bin=GWF2_Planctomycetes_50_10 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
pilT; pili retraction protein pilT
Tax=BJP_IG2102_BRC1_58_13
AR_MS4_05142019_scaffold_1214_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

9644..10894
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSI7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57187.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
AR_MS4_05142019_scaffold_1214_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10930..11382
DNA (453bp) protein (151aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL41_NIAKG
D-tyrosyl-tRNA(Tyr) deacylase
AR_MS4_05142019_scaffold_1214_11
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11738..11920
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:EXJ16138.1}; TaxID=1249627 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
Uncharacterized protein id=4197360 bin=GWF2_Lentisphaerae_57_35 species=Thiocystis violascens genus=Thiocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
AR_MS4_05142019_scaffold_1214_12
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

11985..12575
DNA (591bp) protein (197aa)
Transcriptional regulator, MerR family id=4197359 bin=GWF2_Lentisphaerae_57_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
MerR family transcriptional regulator
Tax=GWF2_Lentisphaerae_57_35_curated
AR_MS4_05142019_scaffold_1214_13
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

12634..13617
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B6CC79
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
AR_MS4_05142019_scaffold_1214_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13638..15782)
DNA (2145bp) protein (715aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Polyphosphate kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMF2_9BACT
ppk; polyphosphate kinase
AR_MS4_05142019_scaffold_1214_15
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15995..17419
DNA (1425bp) protein (475aa)
Uncharacterized protein id=4841851 bin=GWC2_Deltaproteobacteria_55_46 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
radical SAM protein
Tax=GWC2_Deltaproteobacteria_55_46b_curated
AR_MS4_05142019_scaffold_1214_16
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(17497..18315)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000373ADDD
Tax=RBG_16_Planctomycetes_64_10_curated
AR_MS4_05142019_scaffold_1214_17

Not on your lists

18739..19800
DNA (1062bp) protein (354aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=D6CK30_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:CAX69045.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
AR_MS4_05142019_scaffold_1214_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(19944..20411)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKG6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59636.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
AR_MS4_05142019_scaffold_1214_19
unknown

Not on your lists

comp(20810..20926)
DNA (117bp) protein (39aa)

This feature has no annotations

AR_MS4_05142019_scaffold_1214_20
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

21036..22397
DNA (1362bp) protein (454aa)
Hopanoid biosynthesis associated radical SAM protein HpnH n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKG5_9BACT
Hopanoid biosynthesis associated radical SAM protein HpnH {ECO:0000313|EMBL:EEF59635.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hopanoid biosynthesis associated radical SAM protein HpnH
AR_MS4_05142019_scaffold_1214_21
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

22482..23939
DNA (1458bp) protein (486aa)
Hopanoid biosynthesis associated radical SAM protein HpnJ n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKG4_9BACT
Hopanoid biosynthesis associated radical SAM protein HpnJ {ECO:0000313|EMBL:EEF59634.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
radical SAM domain-containing protein
AR_MS4_05142019_scaffold_1214_22
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

24190..24738
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00037248A2
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
AR_MS4_05142019_scaffold_1214_23
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

24791..26005
DNA (1215bp) protein (405aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSV5_OPITP
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACB74799.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
AR_MS4_05142019_scaffold_1214_24
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

26002..26715
DNA (714bp) protein (238aa)
ABC transporter related n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSV4_OPITP
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
AR_MS4_05142019_scaffold_1214_25
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

26712..27866
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSV3_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB74797.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
AR_MS4_05142019_scaffold_1214_26
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

27869..29068
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSV2_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB74796.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
AR_MS4_05142019_scaffold_1214_27
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

29115..29444
DNA (330bp) protein (110aa)
Stress responsive alpha-beta barrel domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMB6_9BACT
Stress responsive alpha-beta barrel domain protein {ECO:0000313|EMBL:EEF58958.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
stress responsive protein
AR_MS4_05142019_scaffold_1214_28
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

29536..30141
DNA (606bp) protein (202aa)
FHA domain containing protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XC98_9BACT
FHA domain containing protein {ECO:0000313|EMBL:EEF62566.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
GAF sensor-containing adenylate/guanylate cyclase
AR_MS4_05142019_scaffold_1214_29

Not on your lists

30208..30774
DNA (567bp) protein (189aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=710817 species="Bacteria; environmental samples.;" source="uncultured bacterium HF770_11D24.;"
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00035C8B66
ubiX; 3-polyprenyl-4-hydroxybenzoate decarboxylase
Displaying 29 items

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