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AR_MS4_05142019_scaffold_1332

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR_MS4_05142019_scaffold_1332_1
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

554..1081
DNA (528bp) protein (176aa)
DNA-directed RNA polymerase, sigma subunit (Sigma70/sigma32) n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DV65_METI4
rpoD; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
DNA-directed RNA polymerase, sigma subunit (Sigma70/sigma32) {ECO:0000313|EMBL:ACD83218.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
AR_MS4_05142019_scaffold_1332_2
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(1115..1288)
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036B85A7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD83217.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
AR_MS4_05142019_scaffold_1332_3
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

1457..2341
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036D71E7
Uncharacterized protein {ECO:0000313|EMBL:KIE57956.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
hypothetical protein
AR_MS4_05142019_scaffold_1332_4
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(2402..2758)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000377DFD5
Uncharacterized protein {ECO:0000313|EMBL:KIE57955.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
AR_MS4_05142019_scaffold_1332_5
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

2901..3320
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003766352
Uncharacterized protein {ECO:0000313|EMBL:KIE57954.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
hypothetical protein
AR_MS4_05142019_scaffold_1332_6
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

3329..4243
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036F425B
Uncharacterized protein {ECO:0000313|EMBL:KIE57953.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
AR_MS4_05142019_scaffold_1332_7
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

4240..4809
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00035DA5F1
Uncharacterized protein {ECO:0000313|EMBL:KIE57952.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
hypothetical protein
AR_MS4_05142019_scaffold_1332_8
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

4828..5472
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000366BF65
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD83210.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
AR_MS4_05142019_scaffold_1332_9
unknown

Not on your lists

comp(5923..6450)
DNA (528bp) protein (176aa)

This feature has no annotations

AR_MS4_05142019_scaffold_1332_10
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6619..8247)
DNA (1629bp) protein (543aa)
merA; mercuric reductase (EC:1.16.1.1)
Mercuric reductase {ECO:0000256|RuleBase:RU361223}; EC=1.16.1.1 {ECO:0000256|RuleBase:RU361223, ECO:0000313|EMBL:CAD84750.1};; Hg(II) reductase {ECO:0000256|RuleBase:RU361223}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
mercuric reductase n=1 Tax=Methyloversatilis universalis RepID=UPI00035E6246
AR_MS4_05142019_scaffold_1332_11

Not on your lists

comp(8256..8540)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037B2A41
Periplasmic mercuric ion binding protein {ECO:0000313|EMBL:EQD67700.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
mercury transporter
AR_MS4_05142019_scaffold_1332_12
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8566..8916)
DNA (351bp) protein (117aa)
Mercuric transport protein n=10 Tax=Proteobacteria RepID=MERT_ALCSP
Mercuric ion transport protein
Tax=CG_Rhodocyc_01
AR_MS4_05142019_scaffold_1332_13

Not on your lists

8988..9431
DNA (444bp) protein (148aa)
Transcriptional regulator, MerR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9Y6_ALIDK
MerR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:KKN63494.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AR_MS4_05142019_scaffold_1332_14
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(9456..10787)
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000381056B
rpoN; DNA-directed RNA polymerase specialized sigma subunit
DNA-directed RNA polymerase specialized sigma subunit {ECO:0000313|EMBL:ACD82703.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
AR_MS4_05142019_scaffold_1332_15
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

10985..11761
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00035EDD74
Metal-dependent hydrolase {ECO:0000313|EMBL:KIE57757.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
phnP; Metal-dependent hydrolase of the beta-lactamase superfamily
AR_MS4_05142019_scaffold_1332_16
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11852..12505)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CWN5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJN14214.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
AR_MS4_05142019_scaffold_1332_17
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12586..12888)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000379FFC0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK72458.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC; 29155)).;"
AR_MS4_05142019_scaffold_1332_18
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13001..13321
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036F248B
NIPSNAP family containing protein
NIPSNAP family containing protein {ECO:0000313|EMBL:CDR16179.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
AR_MS4_05142019_scaffold_1332_19
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

13401..14480
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000381D17C
Alpha/beta hydrolase {ECO:0000313|EMBL:KIE58836.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
alpha/beta hydrolase
AR_MS4_05142019_scaffold_1332_20
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

14511..15686
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00038102AD
Uncharacterized protein {ECO:0000313|EMBL:CCG92911.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
hypothetical protein
AR_MS4_05142019_scaffold_1332_21
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(15656..17218)
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037F1EE4
ATP-dependent protease Clp, ATPase subunit {ECO:0000313|EMBL:CCG92913.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
clpX; ATP-dependent protease Clp, ATPase subunit
AR_MS4_05142019_scaffold_1332_22
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(17269..18216)
DNA (948bp) protein (316aa)
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|SAAS:SAAS00055236};; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00035FC2AA
wcaG; nucleoside-diphosphate-sugar epimerase
AR_MS4_05142019_scaffold_1332_23
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(18198..18989)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00035E942A
16S ribosomal RNA methyltransferase RsmE
Tax=GWF2_Verrucomicrobia_62_7_curated
AR_MS4_05142019_scaffold_1332_24
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(19065..19589)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00035C8E71
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD83878.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
AR_MS4_05142019_scaffold_1332_25
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(19670..21034)
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00035FE070
glcD; FAD/FMN-containing dehydrogenase
FAD/FMN-containing dehydrogenase {ECO:0000313|EMBL:ACD83879.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
AR_MS4_05142019_scaffold_1332_26
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

21125..21679
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003692946
bcp; Peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:ACD83881.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
AR_MS4_05142019_scaffold_1332_27
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

21679..23238
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003606571
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD83882.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
AR_MS4_05142019_scaffold_1332_28
unknown

Not on your lists

comp(23246..23548)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000368F296
AR_MS4_05142019_scaffold_1332_29
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(23548..24537)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003607B93
Opacity protein or related surface antigen
Opacity protein or related surface antigen {ECO:0000313|EMBL:ACD83885.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
AR_MS4_05142019_scaffold_1332_30
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(24662..25135)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000366B559
Heat-shock protein Hsp20 {ECO:0000313|EMBL:KIE58830.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
ibpA; Molecular chaperone, HSP20 family
Displaying items 1-30 of 37 in total

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