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AR_MS4_05142019_scaffold_1707

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR_MS4_05142019_scaffold_1707_1
unknown

Not on your lists

comp(1..216)
DNA (216bp) protein (72aa)

This feature has no annotations

AR_MS4_05142019_scaffold_1707_2

Not on your lists

263..1540
DNA (1278bp) protein (426aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium HF770_11D24 RepID=E0XPV6_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ADI16447.1}; TaxID=710817 species="Bacteria; environmental samples.;" source="uncultured bacterium HF770_11D24.;"
AR_MS4_05142019_scaffold_1707_3
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

Not on your lists

1537..2463
DNA (927bp) protein (309aa)
Methyltransferase FkbM family id=4661531 bin=GWF2_Geobacter_54_21 species=unknown genus=Hydrogenobaculum taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
SAM-dependent methyltransferase
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
AR_MS4_05142019_scaffold_1707_4
Nostoc sp. PCC 7107, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

2488..3066
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Nostoc sp. PCC 7107 RepID=K9QGI6_9NOSO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY43912.1}; TaxID=317936 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. PCC 7107.;"
AR_MS4_05142019_scaffold_1707_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3214..6909)
DNA (3696bp) protein (1232aa)
Conserved repeat domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XI67_9BACT
Conserved repeat domain protein {ECO:0000313|EMBL:EEF60560.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
AR_MS4_05142019_scaffold_1707_6
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(7135..7980)
DNA (846bp) protein (282aa)
NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSE5_OPITP
NADH ubiquinone oxidoreductase 20 kDa subunit
NADH ubiquinone oxidoreductase 20 kDa subunit {ECO:0000313|EMBL:ACB75747.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
AR_MS4_05142019_scaffold_1707_7
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(7983..9578)
DNA (1596bp) protein (532aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSF2_OPITP
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
AR_MS4_05142019_scaffold_1707_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(9575..11050)
DNA (1476bp) protein (492aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSF1_OPITP
Tax=RBG_16_Euryarchaeota_41_19_curated
AR_MS4_05142019_scaffold_1707_9
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(11055..11729)
DNA (675bp) protein (225aa)
Hydrogenase 4 membrane component (E) n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSF0_OPITP
hydrogenase 4 membrane component (E)
Hydrogenase 4 membrane component (E) {ECO:0000313|EMBL:ACB75744.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
AR_MS4_05142019_scaffold_1707_10
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11726..12670)
DNA (945bp) protein (315aa)
Hydrogenase, membrane subunit 3-like protein (EchB-like) n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSE4_OPITP
hydrogenase, membrane subunit 3-like protein (EchB-like)
Tax=GWF2_Verrucomicrobia_62_7_curated
AR_MS4_05142019_scaffold_1707_11
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(12667..14715)
DNA (2049bp) protein (683aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH dehydrogenase (Quinone) n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSE3_OPITP
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
AR_MS4_05142019_scaffold_1707_12
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(14830..15330)
DNA (501bp) protein (167aa)
Putative phosphotransferase system enzyme II n=1 Tax=Gordonia hirsuta DSM 44140 = NBRC 16056 RepID=L7LBK3_9ACTO
putative PTS IIA-like nitrogen-regulatory protein PtsN
Tax=RBG_16_Zixibacteria_53_22_curated
AR_MS4_05142019_scaffold_1707_13
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(15336..15698)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZR74_OPITP
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
AR_MS4_05142019_scaffold_1707_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(15809..16459)
DNA (651bp) protein (217aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XB67_9BACT
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EEF62752.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Entner-Doudoroff aldolase
AR_MS4_05142019_scaffold_1707_15
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(16507..17616)
DNA (1110bp) protein (370aa)
Putative uncharacterized protein id=4611894 bin=GWF2_Lentisphaerae_49_21 species=Akkermansia muciniphila genus=Akkermansia taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=GWF2_Verrucomicrobia_62_7_curated
AR_MS4_05142019_scaffold_1707_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

17802..18893
DNA (1092bp) protein (364aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL61_9BACT
AR_MS4_05142019_scaffold_1707_17
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

18905..19495
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZQS5_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB77826.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
AR_MS4_05142019_scaffold_1707_18
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19554..20993)
DNA (1440bp) protein (480aa)
Protease Do n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I7M7_RHOVT
protease Do
Protease Do {ECO:0000313|EMBL:ADP69643.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
AR_MS4_05142019_scaffold_1707_19
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20986..21351)
DNA (366bp) protein (122aa)
PadR family transcripitonal regulator n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D7DC8C
PadR family transcriptional regulator
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:ADJ23561.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
AR_MS4_05142019_scaffold_1707_20
unknown

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21577..21777
DNA (201bp) protein (67aa)

This feature has no annotations

AR_MS4_05142019_scaffold_1707_21
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(21881..23485)
DNA (1605bp) protein (535aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEK9_9BACT
AR_MS4_05142019_scaffold_1707_22
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

24104..25063
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035CAE18
Tax=RBG_16_Planctomycetes_64_12_curated
Displaying 22 items

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