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AR_MS4_05142019_scaffold_1802

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR_MS4_05142019_scaffold_1802_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2..547)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI000365684F
Type II secretory pathway pseudopilin PulG-like protein {ECO:0000313|EMBL:EEF63054.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
N-terminal cleavage protein
AR_MS4_05142019_scaffold_1802_2
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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1008..3155
DNA (2148bp) protein (716aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F917B
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
AR_MS4_05142019_scaffold_1802_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3145..3696)
DNA (552bp) protein (184aa)
Transcriptional regulator, MarR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ59_9BACT
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEF58063.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
MarR family transcriptional regulator
AR_MS4_05142019_scaffold_1802_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

3846..6191
DNA (2346bp) protein (782aa)
Pyrrolo-quinoline quinone n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ58_9BACT
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:EEF58062.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
pyrrolo-quinoline quinone repeat-containing protein
AR_MS4_05142019_scaffold_1802_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

6248..7843
DNA (1596bp) protein (532aa)
Pyrrolo-quinoline quinone n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ57_9BACT
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:EEF58061.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
pyrrolo-quinoline quinone repeat-containing protein
AR_MS4_05142019_scaffold_1802_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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7859..8098
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=unclassified Verrucomicrobia (miscellaneous) RepID=UPI0003636032
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
AR_MS4_05142019_scaffold_1802_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8109..9674
DNA (1566bp) protein (522aa)
Probable sodium/proline symporter (Proline permease) n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZZG3_9PLAN
sodium/proline symporter (proline permease)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
AR_MS4_05142019_scaffold_1802_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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9649..10734
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744B76
Uncharacterized protein {ECO:0000313|EMBL:EDY17516.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
AR_MS4_05142019_scaffold_1802_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(10802..13366)
DNA (2565bp) protein (855aa)
Peptidase M16 domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUI5_9BACT
Peptidase M16 domain protein {ECO:0000313|EMBL:EDY22223.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
peptidase M16 domain-containing protein
AR_MS4_05142019_scaffold_1802_10
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(13559..13945)
DNA (387bp) protein (129aa)
Transposase IS200-family protein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RE94_9PLAN
Transposase IS200-family protein {ECO:0000313|EMBL:EMI17700.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
transposase
AR_MS4_05142019_scaffold_1802_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(14211..14642)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNG7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58626.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
AR_MS4_05142019_scaffold_1802_12
unknown

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comp(14644..14775)
DNA (132bp) protein (44aa)

This feature has no annotations

AR_MS4_05142019_scaffold_1802_13
uncultured planctomycete, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


comp(14784..17768)
DNA (2985bp) protein (995aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=uncultured planctomycete RepID=H5SC09_9BACT
AR_MS4_05142019_scaffold_1802_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(17865..20258)
DNA (2394bp) protein (798aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCW8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62314.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
AR_MS4_05142019_scaffold_1802_15
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(20449..21738)
DNA (1290bp) protein (430aa)
Tetratricopeptide TPR_2 repeat protein id=4844185 bin=GWC2_Nitrospirae_57_13 species=Calothrix parietina genus=Calothrix taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=GWC2_Nitrospirae_57_13_curated
AR_MS4_05142019_scaffold_1802_16
Calothrix parietina, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(21761..23161)
DNA (1401bp) protein (467aa)
Microtubule-severing ATPase (EC:3.6.4.3)
Microtubule-severing ATPase {ECO:0000313|EMBL:AFZ00045.1}; EC=3.6.4.3 {ECO:0000313|EMBL:AFZ00045.1};; TaxID=1170562 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 6303.;"
Microtubule-severing ATPase n=1 Tax=Calothrix sp. PCC 6303 RepID=K9UYK6_9CYAN
Displaying 16 items

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