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AR_MS4_05142019_scaffold_9501

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR_MS4_05142019_scaffold_9501_1
unknown

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1..222
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000363C64E
AR_MS4_05142019_scaffold_9501_2
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(247..1122)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000381BD7E
F0F1-type ATP synthase, gamma subunit {ECO:0000313|EMBL:CCG91747.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
atpG; F0F1-type ATP synthase subunit gamma
AR_MS4_05142019_scaffold_9501_3
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(1119..2642)
DNA (1524bp) protein (508aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000369FE19
atpA; F0F1 ATP synthase subunit alpha
AR_MS4_05142019_scaffold_9501_4
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(2646..3392)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003771E57
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
atpF; F0F1-type ATP synthase subunit b and delta subunit
AR_MS4_05142019_scaffold_9501_5
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(3426..3695)
DNA (270bp) protein (90aa)
F0F1 ATP synthase subunit C n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00035E9D36
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
atpE; F0F1-type ATP synthase subunit c
AR_MS4_05142019_scaffold_9501_6
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(3712..4377)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00035E30EB
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
atpB; F0F1 ATP synthase subunit A
AR_MS4_05142019_scaffold_9501_7
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(4404..4733)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037EE545
F0F1-type ATP synthase subunit, ATPase_gene1 family {ECO:0000313|EMBL:CCG91752.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
F0F1-type ATP synthase subunit, ATPase_gene1 family
AR_MS4_05142019_scaffold_9501_8
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(4753..5169)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00038083C9
F0F1-type ATP synthase, epsilon subunit {ECO:0000313|EMBL:CCG91753.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
atpC; F0F1-type ATP synthase subunit epsilon
AR_MS4_05142019_scaffold_9501_9
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(5166..6500)
DNA (1335bp) protein (445aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00035EC09E
atpD; F0F1 ATP synthase subunit beta
AR_MS4_05142019_scaffold_9501_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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6717..7913
DNA (1197bp) protein (399aa)
nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00035F3552
AR_MS4_05142019_scaffold_9501_11
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

8112..8801
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00035D3121
Uncharacterized protein {ECO:0000313|EMBL:KIE58158.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
hypothetical protein
AR_MS4_05142019_scaffold_9501_12
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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8804..9595
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00035D29D0
tatC; Sec-independent protein secretion pathway component TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
AR_MS4_05142019_scaffold_9501_13
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(9604..10347)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000373DA15
4-Amino-4-deoxychorismate lyase
4-Amino-4-deoxychorismate lyase {ECO:0000313|EMBL:ACD82779.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
AR_MS4_05142019_scaffold_9501_14
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(10344..11039)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000367A4E9
Thiol:disulfide interchange protein
Thiol:disulfide interchange protein {ECO:0000313|EMBL:ACD82778.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
Displaying 14 items

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