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AR_MS4_05142019_scaffold_6369

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR_MS4_05142019_scaffold_6369_1
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..477)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000367B1D7
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:AIA54829.1}; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
AR_MS4_05142019_scaffold_6369_2
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(541..972)
DNA (432bp) protein (144aa)
DNA ligase D, 3'-phosphoesterase domain protein n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FK02_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS56571.1}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
AR_MS4_05142019_scaffold_6369_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1034..1657
DNA (624bp) protein (208aa)
Peptidase C26 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBG3_9BACT
Peptidase C26 {ECO:0000313|EMBL:EDY16253.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glutamine amidotransferase
AR_MS4_05142019_scaffold_6369_4
Musa acuminata, Musa, Zingiberales, commelinids, Streptophyta, Viridiplantae

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comp(1654..3099)
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003600785
hyuB; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P04000_001}; TaxID=214687 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Zingiberales; Musaceae; Musa.;" source="Musa acuminata subsp. malaccensis (Wild banana) (Musa malaccensis).;"
AR_MS4_05142019_scaffold_6369_5
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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comp(3165..3914)
DNA (750bp) protein (250aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00035FC96B
gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
AR_MS4_05142019_scaffold_6369_6
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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4058..5392
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003676832
Heavy metal RND efflux outer membrane protein,CzcC family {ECO:0000313|EMBL:CCG92727.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
tolC; Heavy metal RND efflux outer membrane protein, CzcC family
AR_MS4_05142019_scaffold_6369_7
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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5389..6648
DNA (1260bp) protein (420aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037AC16B
tolC; Heavy metal RND efflux outer membrane protein, CzcC family
Heavy metal RND efflux outer membrane protein, CzcC family {ECO:0000313|EMBL:ACD82656.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
AR_MS4_05142019_scaffold_6369_8
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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6742..7584
DNA (843bp) protein (281aa)
Membrane-fusion protein n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0JZQ9_9BACT
Membrane-fusion protein {ECO:0000313|EMBL:CCG92728.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
acrA; membrane-fusion protein
AR_MS4_05142019_scaffold_6369_9
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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7634..10849
DNA (3216bp) protein (1072aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036DBBF2
Putative silver-cobalt-zinc-cadmium efflux pump {ECO:0000313|EMBL:ACD82654.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
silver-cobalt-zinc-cadmium efflux pump
AR_MS4_05142019_scaffold_6369_10
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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10970..12832
DNA (1863bp) protein (621aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036C4E14
Cation transporter {ECO:0000313|EMBL:KIE58699.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
silver-cobalt-zinc-cadmium efflux pump
Displaying 10 items

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