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AR_MS4_05142019_scaffold_10178

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR_MS4_05142019_scaffold_10178_1
unknown

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1..273
DNA (273bp) protein (91aa)

This feature has no annotations

AR_MS4_05142019_scaffold_10178_2
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(665..1135)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003615FA5
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
rplM; 50S ribosomal protein L13
AR_MS4_05142019_scaffold_10178_3
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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1276..3093
DNA (1818bp) protein (606aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037988CF
ilvB; Acetolactate synthase large subunit or other thiamine pyrophosphate-requiring enzyme
AR_MS4_05142019_scaffold_10178_4
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(3041..3982)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00035EA4EE
Dihydropteroate synthase or related enzyme {ECO:0000313|EMBL:CCG93191.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
folP; dihydropteroate synthase or related enzyme
AR_MS4_05142019_scaffold_10178_5
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4006..4608)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000366290E
hisB; imidazoleglycerol-phosphate dehydratase
Tax=CG_Syntroph_02
AR_MS4_05142019_scaffold_10178_6
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4780..6060
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037AB1AA
twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:CDB55840.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
AR_MS4_05142019_scaffold_10178_7
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6069..7154
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003700F45
pilT3; twitching motility protein PilT
Twitching motility protein PilT {ECO:0000313|EMBL:AFE09854.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
AR_MS4_05142019_scaffold_10178_trna_1
unknown

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comp(7192..7266)
DNA (75bp)
transferRNA Pro
Displaying 8 items

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