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AR_MS4_05142019_scaffold_8281

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR_MS4_05142019_scaffold_8281_1
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(3..197)
DNA (195bp) protein (65aa)
DNA-directed RNA polymerase, subunit K/omega n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DV23_METI4
rpoZ; DNA-directed RNA polymerase, subunit K/omega
DNA-directed RNA polymerase, subunit K/omega {ECO:0000313|EMBL:ACD83176.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
AR_MS4_05142019_scaffold_8281_2
unknown

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comp(190..333)
DNA (144bp) protein (48aa)

This feature has no annotations

AR_MS4_05142019_scaffold_8281_3
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(330..1034)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036E2AE2
Zn-ribbon protein, possibly nucleic acid-binding
Zn-ribbon protein, possibly nucleic acid-binding {ECO:0000313|EMBL:ACD83175.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
AR_MS4_05142019_scaffold_8281_4
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1108..1836)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037BAC39
Uncharacterized protein {ECO:0000313|EMBL:EJW18999.1}; TaxID=1206781 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei DSM 29.;"
hypothetical protein
AR_MS4_05142019_scaffold_8281_trna_1
unknown

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comp(2101..2172)
DNA (72bp)
transferRNA Val
AR_MS4_05142019_scaffold_8281_5
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2291..2890
DNA (600bp) protein (200aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC; 27009 / DSM 446 / JCM 5260 / NBRC 15652 / NCIMB 11725 / NRRL B-14509 /; 104-1A) (Bacillus acidocaldarius).;"
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003797B96
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
AR_MS4_05142019_scaffold_8281_6
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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2947..3654
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000378EDA1
Nucleoside-diphosphate-sugar pyrophosphorylase {ECO:0000313|EMBL:CCG91544.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
gcd1; nucleoside-diphosphate-sugar pyrophosphorylase
AR_MS4_05142019_scaffold_8281_7
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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3671..4594
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036AF28C
xerD; Site-specific recombinase XerD
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
AR_MS4_05142019_scaffold_8281_8
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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4772..5545
DNA (774bp) protein (258aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
Ribonuclease 3 n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0JWC7_9BACT
rnc; Ribonuclease III
AR_MS4_05142019_scaffold_8281_9
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(5445..8042)
DNA (2598bp) protein (866aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|SAAS:SAAS00086160}; EC=2.7.7.42 {ECO:0000256|SAAS:SAAS00086164};; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037DE92F
glnE; glutamine synthetase adenylyltransferase
AR_MS4_05142019_scaffold_8281_10
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

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comp(8096..8647)
DNA (552bp) protein (184aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=583355 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193; / KCTC 12865).;"
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000360A4A6
porphobilinogen synthase
Displaying 11 items

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