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AR_MS4_05142019_scaffold_19434

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR_MS4_05142019_scaffold_19434_1
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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3..329
DNA (327bp) protein (109aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000378BE21
murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase
AR_MS4_05142019_scaffold_19434_trna_1
unknown

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comp(377..448)
DNA (72bp)
transferRNA Lys
AR_MS4_05142019_scaffold_19434_2
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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592..1413
DNA (822bp) protein (274aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037B8E51
GTP cyclohydrolase I
AR_MS4_05142019_scaffold_19434_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1680..3602
DNA (1923bp) protein (641aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037890F3
thiamine biosynthesis protein ThiC
AR_MS4_05142019_scaffold_19434_4
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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3741..4661
DNA (921bp) protein (307aa)
2-oxoglutarate dehydrogenase {ECO:0000313|EMBL:KIE58599.1}; EC=1.2.4.2 {ECO:0000313|EMBL:KIE58599.1};; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00035F4094
sucA; Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, or related enzyme
Displaying 5 items

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