ggKbase home page

AR_MS4_05142019_scaffold_2329

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR_MS4_05142019_scaffold_2329_1
unknown

Not on your lists

comp(3..146)
DNA (144bp) protein (48aa)

This feature has no annotations

AR_MS4_05142019_scaffold_2329_2
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(259..573)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036E19C3
ethanolamine utilization protein EutN
Tax=GWF2_Verrucomicrobia_62_7_curated
AR_MS4_05142019_scaffold_2329_3
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(580..834)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000364586D
carboxysome shell protein
Carboxysome shell protein {ECO:0000313|EMBL:AHF89556.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
AR_MS4_05142019_scaffold_2329_4
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(929..2131)
DNA (1203bp) protein (401aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00035D246F
acetate kinase
AR_MS4_05142019_scaffold_2329_5
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2174..2455)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003653B26
microcompartments protein
Tax=GWF2_Verrucomicrobia_62_7_curated
AR_MS4_05142019_scaffold_2329_6
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2488..2781)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000380D1A7
carboxysome shell protein
Tax=GWF2_Verrucomicrobia_62_7_curated
AR_MS4_05142019_scaffold_2329_7
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(2833..3492)
DNA (660bp) protein (220aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036674F6
propanediol utilization protein
AR_MS4_05142019_scaffold_2329_8
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

3598..4362
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000361D533
DeoR family transcriptional regulator
Tax=GWF2_Verrucomicrobia_62_7_curated
AR_MS4_05142019_scaffold_2329_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(4908..6155)
DNA (1248bp) protein (416aa)
polysulfide reductase NrfD id=14424382 bin=bin1_lowGC species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin1_lowGC organism_group=Unknown_CP
polysulfide reductase NrfD
Tax=CSP1_2_Dadabacteria
AR_MS4_05142019_scaffold_2329_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(6157..6966)
DNA (810bp) protein (270aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein; K08358 tetrathionate reductase subunit B id=14424383 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
4Fe-4S ferredoxin
Tax=CSP1_2_Dadabacteria
AR_MS4_05142019_scaffold_2329_11
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6963..7379)
DNA (417bp) protein (139aa)
Cytochrome c family protein id=4625334 bin=GWF2_Bacteroidetes_49_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
cytochrome c family protein
Tax=GWF2_Bacteroidetes_49_14_curated
AR_MS4_05142019_scaffold_2329_12
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(7552..7905)
DNA (354bp) protein (118aa)
Cytochrome c class I n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZK3_OPITP
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
AR_MS4_05142019_scaffold_2329_13
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

8254..9906
DNA (1653bp) protein (551aa)
Uncharacterized protein id=4405609 bin=GWC2_Ignavibacteria_38_9 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
AR_MS4_05142019_scaffold_2329_14
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

10217..11707
DNA (1491bp) protein (497aa)
Cytochrome c family protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZTY4_OPITP
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
AR_MS4_05142019_scaffold_2329_15
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

11724..14000
DNA (2277bp) protein (759aa)
Cytochrome b subunit of formate dehydrogenase-like protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZU02_OPITP
cytochrome b subunit of formate dehydrogenase-like protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
AR_MS4_05142019_scaffold_2329_16
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

14190..15401
DNA (1212bp) protein (404aa)
FG-GAP repeat protein id=1806262 bin=GWE2_Bacteroidetes_41_25 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWE2_Bacteroidetes_41_25 organism_group=Bacteroidetes organism_desc=Good
Tax=RBG_13_Spirochaetes_68_11_curated
AR_MS4_05142019_scaffold_2329_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(15409..16197)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF63_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61561.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
AR_MS4_05142019_scaffold_2329_18
unknown

Not on your lists

16402..16710
DNA (309bp) protein (103aa)

This feature has no annotations

AR_MS4_05142019_scaffold_2329_19
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(16584..18944)
DNA (2361bp) protein (787aa)
Immunoglobulin I-set domain protein (Fragment) n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSD5_9BACT
hypothetical protein
Tax=RBG_13_Planctomycetes_50_24_curated
AR_MS4_05142019_scaffold_2329_20
unknown

Not on your lists

comp(19157..20254)
DNA (1098bp) protein (366aa)

This feature has no annotations

Displaying 20 items

View Taxonomy