ggKbase home page

AR_MS4_05142019_scaffold_635_14

Organism: Alum_Rock_2019_MS4_Methylacidiphilum-related_63_13

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(18819..19490)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RecO n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XS07_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 207.0
  • Bit_score: 173
  • Evalue 1.40e-40
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 207.0
  • Bit_score: 173
  • Evalue 2.00e-40
recO; Recombinational DNA repair protein RecO similarity KEGG
DB: KEGG
  • Identity: 32.9
  • Coverage: 143.0
  • Bit_score: 80
  • Evalue 4.70e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 672
ATGAGTCCGGAAACGGCCACCGGCTTCGTGCTGCGGACCCGCCCCCTGACGGAAAGCAGCCTGATTGTGCATTGGCTGACGGCGGAGTTGGGGCGGCTCGCCACGGTGGCCAAGGGTGCGCGCCGCGCGAAGTCCCCTTTCCGGGGCAAACTGGATCTCTTCTACGAGGCTCAGTTCAGTTTCCAAAGGAGCCCTCGTTCGGATCTGCACACGTTGCGGGAGGTGGCGCTGCTGGGCGTGCCGCAAGCGCCGAGGCGCGACTTGGGATGCCTTACCCAGGCTTCCTACGCTGCGCGCTTGGTGGAAAGAAGCACCGAGCCAGAAGCGCCCCTGCCGGAAGTGCATGACCTGTTCCGGGGGTTCCTACAATGGCTGGAAGCCGGTGGGGCTTCCGCGGCGGGGATGCTGGCCTTCGAACTGCGGTTGCTCACGGTTCTCGGCGGAGCGCCCGGGAATTCCGCCCTTCGTCTGGGGACGCAGGCCTTGGAGTCCTGGGGGACTCTGGCAGGCAGGTCTTGGAACAGCCTGCCAGCCGTTGACATCAGGAGTCGTCCGGGCCGTGAACTTACCCTGGCGTTGGGAGGCTATTTAGAGGAGGCCTTGGGCAGTGTGCCGCCGGAGCGACCCCAAGCGCTGGGGCTGACCGGGGGCGGACCAGTGAGCCCCGTTTAG
PROTEIN sequence
Length: 224
MSPETATGFVLRTRPLTESSLIVHWLTAELGRLATVAKGARRAKSPFRGKLDLFYEAQFSFQRSPRSDLHTLREVALLGVPQAPRRDLGCLTQASYAARLVERSTEPEAPLPEVHDLFRGFLQWLEAGGASAAGMLAFELRLLTVLGGAPGNSALRLGTQALESWGTLAGRSWNSLPAVDIRSRPGRELTLALGGYLEEALGSVPPERPQALGLTGGGPVSPV*