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AR_MS4_05142019_scaffold_635

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR_MS4_05142019_scaffold_635_1
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(281..1180)
DNA (900bp) protein (300aa)
Xylose isomerase domain protein TIM barrel id=3223570 bin=GWF2_Bacteroidetes_41_9 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
AR_MS4_05142019_scaffold_635_2
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(1177..5874)
DNA (4698bp) protein (1566aa)
Multi-sensor hybrid histidine kinase id=2911200 bin=GWF2_Lentisphaerae_57_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
multi-sensor hybrid histidine kinase
Tax=GWF2_Lentisphaerae_57_35_curated
AR_MS4_05142019_scaffold_635_3
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(5993..7420)
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745A8F
hypothetical protein
Tax=RBG_16_Aminicenantes_63_16_curated
AR_MS4_05142019_scaffold_635_4
GWC2_Planctomycetes_45_44_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(7458..8507)
DNA (1050bp) protein (350aa)
Oxidoreductase, putative glucose--fructose oxidoreductase id=3104109 bin=GWC2_Planctomycetes_45_44 species=Clostridium tetani genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
afr; 1,5-anhydro-D-fructose reductase
Tax=GWC2_Planctomycetes_45_44_curated
AR_MS4_05142019_scaffold_635_5
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(8519..9796)
DNA (1278bp) protein (426aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Putative uncharacterized protein id=4215181 bin=GWF2_Planctomycetes_42_9 species=Klebsiella oxytoca genus=Klebsiella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
Tax=RBG_13_Planctomycetes_60_9_curated
AR_MS4_05142019_scaffold_635_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9833..10765)
DNA (933bp) protein (311aa)
Glucosamine/galactosamine-6-phosphate isomerase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5P8_9BACT
Glucosamine/galactosamine-6-phosphate isomerase {ECO:0000313|EMBL:EDY18101.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glucosamine-6-phosphate isomerase
AR_MS4_05142019_scaffold_635_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10799..11602)
DNA (804bp) protein (268aa)
LmbE family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLY7_9BACT
LmbE family protein {ECO:0000313|EMBL:EEF59115.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
LmbE family protein
AR_MS4_05142019_scaffold_635_8
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(11592..12635)
DNA (1044bp) protein (348aa)
Oxidoreductase domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLY8_9BACT
oxidoreductase domain protein
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
AR_MS4_05142019_scaffold_635_9
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

13040..14350
DNA (1311bp) protein (437aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYP8_ROSS1
HEAT repeat-containing PBS lyase
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:ABQ91751.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
AR_MS4_05142019_scaffold_635_10
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14365..15555
DNA (1191bp) protein (397aa)
Response regulator, CheY-like n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGY4_9BACT
CheY-like response regulator
Tax=CG_Syntroph_02
AR_MS4_05142019_scaffold_635_trna_1
unknown

Not on your lists

15731..15812
DNA (82bp)
transferRNA Leu
AR_MS4_05142019_scaffold_635_11
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

15892..17499
DNA (1608bp) protein (536aa)
Putative transcriptional regulator, Crp/Fnr family id=5014877 bin=GWA2_Elusimicrobia_66_18 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
cAMP-binding protein
Tax=RBG_13_Nitrospirae_39_12_curated
AR_MS4_05142019_scaffold_635_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(17536..18081)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00035FB2A0
Uncharacterized protein {ECO:0000313|EMBL:EEF60649.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
AR_MS4_05142019_scaffold_635_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

18265..18801
DNA (537bp) protein (179aa)
FeS assembly SUF system protein SufT n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGQ0_9BACT
FeS assembly SUF system protein SufT {ECO:0000313|EMBL:EEF61101.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
AR_MS4_05142019_scaffold_635_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(18819..19490)
DNA (672bp) protein (224aa)
DNA repair protein RecO n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XS07_9BACT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
recO; Recombinational DNA repair protein RecO
AR_MS4_05142019_scaffold_635_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(19487..20191)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XS06_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57377.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
AR_MS4_05142019_scaffold_635_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(20205..20711)
DNA (507bp) protein (169aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Endoribonuclease YbeY n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XS05_9BACT
hypothetical protein
AR_MS4_05142019_scaffold_635_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(20680..21642)
DNA (963bp) protein (321aa)
PhoH family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XS04_9BACT
PhoH family protein {ECO:0000313|EMBL:EEF57375.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
phoH; phosphate starvation-inducible protein PhoH, predicted ATPase
AR_MS4_05142019_scaffold_635_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(21632..22171)
DNA (540bp) protein (180aa)
Histidine triad (HIT) protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XS03_9BACT
Histidine triad (HIT) protein {ECO:0000313|EMBL:EEF57374.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase
AR_MS4_05142019_scaffold_635_19
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(22307..23824)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F628_9BACE
ADP-ribosylation/crystallin J1
Tax=GWF2_Verrucomicrobia_62_7_curated
AR_MS4_05142019_scaffold_635_20
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(23941..24972)
DNA (1032bp) protein (344aa)
Electron transfer flavoprotein alpha subunit-like protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ91_OPITP
electron transfer flavoprotein alpha subunit-like protein
Electron transfer flavoprotein alpha subunit-like protein {ECO:0000313|EMBL:ACB77163.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
AR_MS4_05142019_scaffold_635_21
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(24996..25805)
DNA (810bp) protein (270aa)
Electron transfer flavoprotein beta subunit-like protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ90_OPITP
electron transfer flavoprotein beta subunit-like protein
Tax=GWF2_Verrucomicrobia_62_7_curated
AR_MS4_05142019_scaffold_635_22
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(26005..27831)
DNA (1827bp) protein (609aa)
electron-transferring-flavoprotein dehydrogenase (EC:1.5.5.1)
Electron-transferring-flavoprotein dehydrogenase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ89_OPITP
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
AR_MS4_05142019_scaffold_635_23
unknown

Not on your lists

comp(28056..28454)
DNA (399bp) protein (133aa)

This feature has no annotations

AR_MS4_05142019_scaffold_635_24
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(28561..29460)
DNA (900bp) protein (300aa)
HEAT domain containing protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQG4_9BACT
HEAT domain containing protein {ECO:0000313|EMBL:EEF57889.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
AR_MS4_05142019_scaffold_635_25
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(29697..30821)
DNA (1125bp) protein (375aa)
8-amino-7-oxononanoate synthase id=8266634 bin=CD_OP8_4m species=Sinorhizobium meliloti genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
kbl; 2-amino-3-ketobutyrate coenzyme A ligase
Tax=RBG_13_Planctomycetes_63_9_curated
AR_MS4_05142019_scaffold_635_26
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

31017..33419
DNA (2403bp) protein (801aa)
Putative uncharacterized protein id=1702983 bin=GWA2_Bacteroidetes_42_15 species=Lachnospiraceae bacterium 3_1_57FAA_CT1 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
AR_MS4_05142019_scaffold_635_27
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33532..34161
DNA (630bp) protein (210aa)
Pit accessory protein {ECO:0000313|EMBL:KFN44353.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
Putative uncharacterized protein id=2489087 bin=GWF1_Xanthomonadales_69_6 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
pit accessory protein
AR_MS4_05142019_scaffold_635_28
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

34176..35270
DNA (1095bp) protein (365aa)
Phosphate transporter n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIB1_9BACT
Phosphate transporter {ECO:0000313|EMBL:EEF60372.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Phosphate/sulfate permease
AR_MS4_05142019_scaffold_635_29
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

35369..37501
DNA (2133bp) protein (711aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
UvrD/REP helicase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNK2_9BACT
UvrD/REP helicase
Displaying items 1-30 of 37 in total

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