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AR_MS4_05142019_scaffold_888_23

Organism: Alum_Rock_2019_MS4_Methylacidiphilum-related_63_13

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(31033..32577)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma 70 family subunit n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XC37_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 341.0
  • Bit_score: 402
  • Evalue 5.70e-109
Putative RNA polymerase, sigma 70 family subunit {ECO:0000313|EMBL:EEF62505.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 341.0
  • Bit_score: 402
  • Evalue 8.00e-109
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 430.0
  • Bit_score: 220
  • Evalue 6.70e-55

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1545
ATGACGTTGGTGCAGGAATACGCCCGGAGCCATTCCGAGGAGGCGTTCGCCGCGTTGGTGTCGCGGCATGTCGATCTGGTCTATTCGGTCGCCCTGCGCTGCGTCGCTGACCCCCATCTGGCCGAGGACATCACGCAGAGCGTCTTCATCCTCTTGGCGCGGAAGGCGGAAGCGCTGAGCCCGCAGACGATTCTCTCCGGCTGGCTCTGCCGCACGGCGCGTTATGTCTCCGCCGACGCCCTCAAAGTCCAGCGCCGCCGCCAAGCCCGCGAACAGGAGTCACAGATGCAAACCACGGTGGACGAAGCGGATGCCGAGGCCTGGCGCCACATCGCGCCGCTGTTGGAGGAGGCGCTGGGTTGCCTGGGGGAGAAGGAACACGATGCCGTCGTGCTCCGTTTCTTGGAAGGCAAGGCGCTGAAGCAGGTCGGGGCGGCCATGGGCACGGGCGAGGACGCGGCCCGGATGCGCGTGACCCGGGGATTGGAGAAGCTGCGGGCCTACTTCTCGCGCAGAGGCGTGACGCTTTCCACCGCGGCCATCGCCGGGGCCGTGGCCGCCCATGCCGTGCAAGCCGCGCCAACCGGACTCACCACTGCCATCACCACCAGCGTGCTTTCCGCGACCAGCCTGACCGCCGGCGCCATCGCAGCCGGCACCAAAGCCATTGCCATGACCACCCTGCAGAAGACCCTCGTGGCGGCCACCGTGACCCTGCTGACGGGCGCCGTCCTGTTCGAAGCCCACCAGGCCACCCAACTGCGCGACCAGGTCCGCGCCCTCCAGGTGCAGACTGCGCCGCTCGGCGACAAGCTCCTGCAAGCGCAGCGCGAGCGCGACGAAACGGCCCGTCAACTCGCCTTGTTGCGCGAGGAGAACGAGCAGTTGCATCGCAACACTGCCGAACTGCTCAGACTGCGCTCGGAGGTGGGACGCCTGCGGGAGGCGTCGCGCCAGGTCGCGGGCGGGACGTCCGCCGAGGCGAGCGATCCGACCGCGTCGGCGGCGCAAACCTGGCTCAGCCGGGTGAGACTCCTCCGCGAACGCTTCGACCAGTGGCCGGGCAAGCGCACCCCGGAACTGCAACTGCTGAGCGAACAGGATTGGTTGAATGAAGCCGCCAAGCGCGAGTTCGACGGGGACGCCGCGATCCGCGAGGCGATGGGGCATTTGCGGTGGACCGCCAAAGCCAAGCTTGCCTCGGCGGTCAAGGAAGCGCTGGAGCGGTTTGCCATGCAAAACGGCGAGCAACTGCCCTCGAGCCTGGAGCAGTTGCGGCCCTTCCTGACGCCACCCGCGGATGGCCTGCTGGAAGGCTACGAAATTGCCAAGCCCGGCTCGGTCCGTCCGCCCCAGCCCAACGCCCCGGAAAGCGTCAACGCGGAGACCTGGGCGATGGTGGAGAAGGGGAACTTCACTTCCAACGGGGTCCCAATCCGCGATGGCAGCAACCTCGCCGACCCCGAGTACGACATGTACGTCGTCATCTACCGCGGGGGCTACTACGGCTACGGAACGGGCAAACCCAGGCCCGCGTCCAACTGA
PROTEIN sequence
Length: 515
MTLVQEYARSHSEEAFAALVSRHVDLVYSVALRCVADPHLAEDITQSVFILLARKAEALSPQTILSGWLCRTARYVSADALKVQRRRQAREQESQMQTTVDEADAEAWRHIAPLLEEALGCLGEKEHDAVVLRFLEGKALKQVGAAMGTGEDAARMRVTRGLEKLRAYFSRRGVTLSTAAIAGAVAAHAVQAAPTGLTTAITTSVLSATSLTAGAIAAGTKAIAMTTLQKTLVAATVTLLTGAVLFEAHQATQLRDQVRALQVQTAPLGDKLLQAQRERDETARQLALLREENEQLHRNTAELLRLRSEVGRLREASRQVAGGTSAEASDPTASAAQTWLSRVRLLRERFDQWPGKRTPELQLLSEQDWLNEAAKREFDGDAAIREAMGHLRWTAKAKLASAVKEALERFAMQNGEQLPSSLEQLRPFLTPPADGLLEGYEIAKPGSVRPPQPNAPESVNAETWAMVEKGNFTSNGVPIRDGSNLADPEYDMYVVIYRGGYYGYGTGKPRPASN*