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AR_MS4_05142019_scaffold_3360_12

Organism: Alum_Rock_2019_MS4_Methylacidiphilum-related_63_13

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(11740..12657)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 287.0
  • Bit_score: 224
  • Evalue 1.00e-55
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003801C3A similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 305.0
  • Bit_score: 445
  • Evalue 2.70e-122
aroE; Shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 288.0
  • Bit_score: 221
  • Evalue 2.30e-55

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Taxonomy

Methylacidiphilum kamchatkense → Methylacidiphilum → Methylacidiphilales → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 918
ATGGCCGACCTCGCAAGCGCAATTTGGCGCCTTCCCAGCCTCCCCAAGTCTCTGCCGTGGCCAAAGTCCTACGCCGTTCTCGGCTCCCCGATCGCGCATTCTCTCTCGCCGGTGATCCATCAGGCCGCCTTCGCCGAGATCGGCTGGCCGGCGGGCTACGGGCGTGTGGAGGTGGACGGGGACGAGCTCGAGGCCGTCGTCGATCGGCTCAAGGCGATCGGCTTTTGCGGATGGAACTGCACCGCGCCTCTCAAGCGAGAGATGTTTCGTCTCTGTGATCGAAGAGCCGCCACTGCGCTAAGGCTCGGCTCCGTTAACACCGTGCGGCAGGAGAAAGGGATACTCGAAGGGCACAATACCGATGGACAGGGATGGGTGCTTGCGGTCGGGGAGGCCTTTTCCGTTCCCCTTAGCCAACTACGAATTCTCTTCTTGGGTCTCGGCGGGGCGGGTGCGGCTCTCGCCCGCCAGGCTGCCTGGGAGGGCTGTCCTCTTCTTCTCCTTGCGAATCGCACGGTCTCCAAAGCCGTCTCCCTGGCCGAAGAGATCAAACCGCGCTCCCGGGTCGATGTCGTTACCTGGGAGGAGGGTTCCCTTTCCGAAGCGGCACCCGAGGCCGATCTCCTCGTCTCCTGTCTCGCTGACAATCCCTCTTTTTTGACGAATCCTCGCTTCCTCGATCGACTTCTTCGACCAGGTCTCTTCGTTTTCGACCTGCGCTACTGGCCGCCCGAATCGCATCTGCTCAAAGCTGCCCGCGAAAGGGGTGCGCACGTGGCAAATGGACTCGGAATGCTCCTCCATCAGGCTGCCCTGGCTTTTGAGCTCTGGACGAATTGCCCGGCACCTCTTTCCACCATGCGCCGGGCCCTCGCCGCTTCTCTCTCGTCCAGAACGTCGAAGAGCGTCCTGGGCTAA
PROTEIN sequence
Length: 306
MADLASAIWRLPSLPKSLPWPKSYAVLGSPIAHSLSPVIHQAAFAEIGWPAGYGRVEVDGDELEAVVDRLKAIGFCGWNCTAPLKREMFRLCDRRAATALRLGSVNTVRQEKGILEGHNTDGQGWVLAVGEAFSVPLSQLRILFLGLGGAGAALARQAAWEGCPLLLLANRTVSKAVSLAEEIKPRSRVDVVTWEEGSLSEAAPEADLLVSCLADNPSFLTNPRFLDRLLRPGLFVFDLRYWPPESHLLKAARERGAHVANGLGMLLHQAALAFELWTNCPAPLSTMRRALAASLSSRTSKSVLG*