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AR_MS4_05142019_scaffold_2657_12

Organism: Alum_Rock_2019_MS4_Methylacidiphilum-related_63_13

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(9653..10489)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036028EF similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 278.0
  • Bit_score: 508
  • Evalue 2.30e-141
rpoD; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 273.0
  • Bit_score: 431
  • Evalue 1.80e-118
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 273.0
  • Bit_score: 431
  • Evalue 6.70e-118

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Taxonomy

Methylacidiphilum kamchatkense → Methylacidiphilum → Methylacidiphilales → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 837
ATGATCGATAACGATTCTGCGCTCAAGCTTTACTTGCGGGAAATCAGCCAAGTCCCCCTCTTGCGCCGGGAAGAAGAGGTGGAGTTGGCGCACCGCATCCAAAAGGGAGATGCGGCTGCCCGTCAAAAAATGATCCAAGCCAATCTGCGCTTGGTCGTGAAGATCGCACACGATTACTCGACCAGCGGCCTCCCTCTTCTCGATCTGATTTCGGAAGGAAACATCGGTTTGATGAAGGCGGTCGATCGCTTCGATCCGTCCAAAGGCGGGAAGCTGAGCACCTATGCCGCCTGGTGGATCAAGCAGTCGATCAAGCGGGCTCTCGCCAACCAGAGCAAAACGATTCGTCTCCCCGTTCACCTGGTGGACAAGATCGCGCGGATGCGGCGGACGGCGATCCGTCTGGCCGAGGAGTTCGGACGGGAGCCGACCGATGAGGAGCTGGCCCATGAGCTGGGGATCTCTTCCTCCCGGGTTGGGGAGCTTCGCACGATCGCCATTCAGCCGGCTTCGCTCAACGCGACGGTAGGCGAAGAAGAGGACGGCACCTCGCTCGGAGAGCTCGTAAAGGATGAAAGCGCCATCGATCCGTCGTCCATTATCCAGAGCGAGAACTTAAGAAAGACAGTGATGGACCTCTTGCCCACCCTGGACGCCCGGGAACGCAAGATCCTAGCCCTTCGCTTCGGGCTGGAGGGGAACCAGGAGATGACCTTGGAGGAGATCGGCAAGCGATTCCATGTGACTCGGGAACGGATTCGGCAGCTCCAAAACATTGCTTTGCGGAAGGTGCGCCGCGCTCTGGAGAAGAAGGAGAAGCGCCAGCTCATCCGATGA
PROTEIN sequence
Length: 279
MIDNDSALKLYLREISQVPLLRREEEVELAHRIQKGDAAARQKMIQANLRLVVKIAHDYSTSGLPLLDLISEGNIGLMKAVDRFDPSKGGKLSTYAAWWIKQSIKRALANQSKTIRLPVHLVDKIARMRRTAIRLAEEFGREPTDEELAHELGISSSRVGELRTIAIQPASLNATVGEEEDGTSLGELVKDESAIDPSSIIQSENLRKTVMDLLPTLDARERKILALRFGLEGNQEMTLEEIGKRFHVTRERIRQLQNIALRKVRRALEKKEKRQLIR*