ggKbase home page

AR_MS4_05142019_scaffold_5063_6

Organism: Alum_Rock_2019_MS4_Methylacidiphilum-related_63_13

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(3797..4339)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036846B1 similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 180.0
  • Bit_score: 303
  • Evalue 9.70e-80
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 178.0
  • Bit_score: 238
  • Evalue 1.10e-60
50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 178.0
  • Bit_score: 238
  • Evalue 5.40e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylacidiphilum infernorum → Methylacidiphilum → Methylacidiphilales → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 543
ATGTCGCGAATCGGAAAAAGGCCGATCCCGGTACCCGCCGGCGTCAAGATTGCCATCACGGACGGCACGGTTGCTGTCGAAGGGCCGAAAGGAAAGGCATCGCATCGACTCCCCGATTGTCTGGCCGCGACCGAGACCGAGGGGGGGCTCACCGTCCAGAACCGGAGTCAAGAGCGGAAAAGTCGAGCTCTGCATGGTTTGCACCGAACCCTGCTCGCCAACGCGGTAACGGGCGTTGACGCGGGCTTTCGCAAGCAGCTCGAGATTCACGGGGTGGGTTTCCGTGCCGCGGTTCAAGGGAAGGAGCTCACATTGAGCTTGGGCTTCTCGCACCCGGTCGTCTATTCGATCCCCGAGGGGATTCGCATCACCGTGACCGAGAACACCAAATTGCTGATCGAAGGGATCGACAAGTGCCTGGTCGGCCAGGTGGCAGCCGAGATCCGCCGCTTCTATCATCCGGAACCCTATAAAGGGAAAGGGGTCCGCTATGTGGGCGAGGCGATCCGGCGAAAGGCGGGCAAGACCGCGCAAGGAAAGTAG
PROTEIN sequence
Length: 181
MSRIGKRPIPVPAGVKIAITDGTVAVEGPKGKASHRLPDCLAATETEGGLTVQNRSQERKSRALHGLHRTLLANAVTGVDAGFRKQLEIHGVGFRAAVQGKELTLSLGFSHPVVYSIPEGIRITVTENTKLLIEGIDKCLVGQVAAEIRRFYHPEPYKGKGVRYVGEAIRRKAGKTAQGK*