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AR_MS4_05142019_scaffold_9272_5

Organism: Alum_Rock_2019_MS4_Methylacidiphilum-related_63_13

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 1892..2710

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 274.0
  • Bit_score: 269
  • Evalue 3.30e-69
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036AD46D similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 272.0
  • Bit_score: 430
  • Evalue 1.00e-117
dapF; diaminopimelate epimerase similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 274.0
  • Bit_score: 259
  • Evalue 8.90e-67

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Taxonomy

Methylacidiphilum fumariolicum → Methylacidiphilum → Methylacidiphilales → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 819
ATGAAGCTTCATTTTACGAAAATGACAGGGGCCGGCAATGACTTTATCCTGGTCGACAACCGGAACGGCCGCCTTCAACTCGAGCCGGGTCAGATCGCCCGGCTCTGCGATCGACATTTCGGAATCGGGGCCGACGGGTTCCTCCTTGCGGAAACGGACGGGAAGGAAGAGCTCATTCGGATGCGTTATTACAACTCCGATGGCGGGGAGGCTTCCCTTTGCGGAAATGGGGCCCGGTGCTTTGCCCGCTTCGTGCGGCCTTTTTTCAAAGGGAAGGAGGTGGGACGGATCTCTTTTCTCACCGGCGCCGGACCCGTGGAGGCCTCGTTCCCGGGAGAGGAGGTCTCCCTCGCGATGCCCGACCCCGGCAAGGCCCGTCTCCGGTGGCAGCTCGCCACACGGCAGGGGCCGCTGGAGGCTCACTGGATTGATACCGGCGTTCCCCATCTGGTGACCTTTGTAGGGAGCGTGGAGCAGATCGAGGTGGAGGAGCTGGGGCGAGAACTGAGATGGCTGCCGGACCTTGCTCCGGACGGGGCTAATGTCGACTTCGTGGAAGTGCGGGGCACGGACCGGATTGCGGTGCGGACCTATGAGCGGGGGGTCGAGGGAGAAACGCTGGCTTGCGGAACCGGGGTCACCGCCTCCGCTCTAGTGGCTCACTTGGCCAGAGGGATCCCGTCTCCGGTATCGGTCCTTGTTCGGAGCGGAGAGAGCCTCCGTGTCGCCTTCGAGCCCACGGGCGATGGATTTCGTGGGGTTCGGCTCCAGGGCCCGGCTAGAATCGTGTTCACAGGAGAGGTGGAGATACAGGAATGA
PROTEIN sequence
Length: 273
MKLHFTKMTGAGNDFILVDNRNGRLQLEPGQIARLCDRHFGIGADGFLLAETDGKEELIRMRYYNSDGGEASLCGNGARCFARFVRPFFKGKEVGRISFLTGAGPVEASFPGEEVSLAMPDPGKARLRWQLATRQGPLEAHWIDTGVPHLVTFVGSVEQIEVEELGRELRWLPDLAPDGANVDFVEVRGTDRIAVRTYERGVEGETLACGTGVTASALVAHLARGIPSPVSVLVRSGESLRVAFEPTGDGFRGVRLQGPARIVFTGEVEIQE*