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AR_MS4_05142019_scaffold_1771

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR_MS4_05142019_scaffold_1771_1
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..549
-----------------
DNA (549bp)
protein (183aa)
UDP-N-acetylglucosamine pyrophosphorylase (EC:2.7.7.23)
UDP-N-acetylglucosamine pyrophosphorylase id=3180722 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=GWC2_Syntrophus_56_31_curated
AR_MS4_05142019_scaffold_1771_2
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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604..1623
-----------------
DNA (1020bp)
protein (340aa)
tRNA-dihydrouridine synthase id=2741988 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
tRNA-dihydrouridine synthase
Tax=CG_Syntroph_01
AR_MS4_05142019_scaffold_1771_3
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1608..2312)
-----------------
DNA (705bp)
protein (235aa)
livF6; protein LivF6 (EC:3.6.3.-)
LivF6 {ECO:0000313|EMBL:ACN17920.1}; EC=3.6.3.- {ECO:0000313|EMBL:ACN17920.1};; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2).;"
amino acid ABC transporter ATPase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B54BEF
AR_MS4_05142019_scaffold_1771_4
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2299..3066)
-----------------
DNA (768bp)
protein (256aa)
LivG5 n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QIH7_DESAH
livG5; protein LivG5
LivG5 {ECO:0000313|EMBL:ACN17921.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2).;"
AR_MS4_05142019_scaffold_1771_5
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3059..3940)
-----------------
DNA (882bp)
protein (294aa)
branched-chain amino acid ABC transporter permease n=1 Tax=Desulfospira joergensenii RepID=UPI0003B73AF0
livM5; protein LivM5
Tax=CG_Desulfarul_01
AR_MS4_05142019_scaffold_1771_6
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3943..4815)
-----------------
DNA (873bp)
protein (291aa)
ABC transporter permease n=1 Tax=Desulfospira joergensenii RepID=UPI0003B42575
livH5; protein LivH5
LivH5 {ECO:0000313|EMBL:ACN17923.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2).;"
AR_MS4_05142019_scaffold_1771_7
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4896..6005)
-----------------
DNA (1110bp)
protein (370aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B77EDB
livK2; protein LivK2
Tax=CG_Desulfarul_01
AR_MS4_05142019_scaffold_1771_8
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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6298..6525
-----------------
DNA (228bp)
protein (76aa)
Hypothetical cytosolic protein id=2771250 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
cytoplasmic protein
Tax=CG_Syntroph_01
AR_MS4_05142019_scaffold_1771_9
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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6565..6840
-----------------
DNA (276bp)
protein (92aa)
Hypothetical cytosolic protein id=2771253 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=CG_Syntroph_01
AR_MS4_05142019_scaffold_1771_10
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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7121..8686
-----------------
DNA (1566bp)
protein (522aa)
Ribonuclease Y id=2741970 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
hydrolase
Tax=CG_Syntroph_01
AR_MS4_05142019_scaffold_1771_11
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8695..9477
-----------------
DNA (783bp)
protein (261aa)
Calcineurin-like phosphoesterase id=2741967 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
calcineurin-like phosphoesterase
Tax=CG_Syntroph_01
AR_MS4_05142019_scaffold_1771_12
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9693..10979
-----------------
DNA (1287bp)
protein (429aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase id=2771261 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=CG_Syntroph_01
AR_MS4_05142019_scaffold_1771_13
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11101..12018)
-----------------
DNA (918bp)
protein (306aa)
adenosine kinase (EC:2.7.1.20)
Carbohydrate kinase {ECO:0000313|EMBL:KFO67153.1}; TaxID=1499107 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCADC.;"
Adenosine kinase id=4295725 bin=GWC2_Syntrophus__56_31 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
AR_MS4_05142019_scaffold_1771_14

Not on your lists

comp(12059..12700)
-----------------
DNA (642bp)
protein (214aa)
Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWK0_SYNAS
Marine sediment metagenome DNA, contig: S12H4_S09976 {ECO:0000313|EMBL:GAI91009.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cytoplasmic protein
AR_MS4_05142019_scaffold_1771_15
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12841..14019)
-----------------
DNA (1179bp)
protein (393aa)
Arabinose efflux permease family protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CCZ3_DESTA
arabinose efflux permease family protein
Tax=RBG_16_Deltaproteobacteria_54_18_curated
AR_MS4_05142019_scaffold_1771_16
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14016..14873)
-----------------
DNA (858bp)
protein (286aa)
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CCZ1_DESTA
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
Tax=BJP_IG2069_Desfulfarculales_53_13
AR_MS4_05142019_scaffold_1771_17
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14870..15346)
-----------------
DNA (477bp)
protein (159aa)
(2Fe-2S)-binding domain protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AP58_PELPD
2Fe-2S iron-sulfur cluster binding domain-containing protein
Tax=RBG_16_Deltaproteobacteria_54_18_curated
AR_MS4_05142019_scaffold_1771_18
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15343..17694)
-----------------
DNA (2352bp)
protein (784aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein (EC:1.17.1.4)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CCY9_DESTA
Tax=RBG_16_Deltaproteobacteria_54_18_curated
AR_MS4_05142019_scaffold_1771_19
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17975..19081)
-----------------
DNA (1107bp)
protein (369aa)
histidinol phosphate aminotransferase apoenzyme (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CAE5_DESTA
Tax=RBG_16_Deltaproteobacteria_54_18_curated
AR_MS4_05142019_scaffold_1771_20
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19090..20400)
-----------------
DNA (1311bp)
protein (437aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CAE4_DESTA
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_18_curated
AR_MS4_05142019_scaffold_1771_21
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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20634..22370
-----------------
DNA (1737bp)
protein (579aa)
Putative sigma54 specific transcriptional regulator n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CLS8_SYNLT
sigma54 specific transcriptional regulator
Tax=RBG_16_Deltaproteobacteria_47_11_curated
AR_MS4_05142019_scaffold_1771_22

Not on your lists

22765..24069
-----------------
DNA (1305bp)
protein (435aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM72650.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GabT id=1752816 bin=GWB2_Desulfobacterales_56_26 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
4-aminobutyrate aminotransferase
AR_MS4_05142019_scaffold_1771_23
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24187..24540
-----------------
DNA (354bp)
protein (118aa)
Extracellular ligand-binding receptor n=1 Tax=Geobacter sp. (strain M18) RepID=E8WNK1_GEOS8
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADW11851.1}; Flags: Precursor;; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
Displaying 23 items

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