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14_1009_05_20cm_scaffold_822

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_05_20cm_scaffold_822_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3..287)
DNA (285bp) protein (95aa)
ABC transporter-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXB0_9BACT
ABC transporter-related protein {ECO:0000313|EMBL:EDY20908.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
multidrug ABC transporter ATPase
14_1009_05_20cm_scaffold_822_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(280..555)
DNA (276bp) protein (92aa)
Acylphosphatase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXB1_9BACT
Acylphosphatase {ECO:0000256|SAAS:SAAS00255930}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
acylphosphatase
14_1009_05_20cm_scaffold_822_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(627..1061)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVY6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21578.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
14_1009_05_20cm_scaffold_822_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1058..1960)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVY5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21577.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
14_1009_05_20cm_scaffold_822_5
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2050..3333
DNA (1284bp) protein (428aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
Phosphopyruvate hydratase (EC:4.2.1.11)
Enolase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DY22_9BACT
14_1009_05_20cm_scaffold_822_6
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3334..3696
DNA (363bp) protein (121aa)
Septum formation initiator n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3Y8_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
14_1009_05_20cm_scaffold_822_7

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3790..4881
DNA (1092bp) protein (364aa)
peptide chain release factor 2 n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744B49 rbh
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
peptide chain release factor 2
14_1009_05_20cm_scaffold_822_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4904..5584)
DNA (681bp) protein (227aa)
Aminotransferase class V n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ15_9BACT
Aminotransferase class V {ECO:0000313|EMBL:EDY20706.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
14_1009_05_20cm_scaffold_822_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5571..6725)
DNA (1155bp) protein (385aa)
cysteine desulfurase (EC:2.8.1.7)
Aminotransferase class V n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ15_9BACT
Aminotransferase class V {ECO:0000313|EMBL:EDY20706.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
14_1009_05_20cm_scaffold_822_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6810..7733)
DNA (924bp) protein (308aa)
Serine O-acetyltransferase {ECO:0000313|EMBL:EDY20708.1}; EC=2.3.1.30 {ECO:0000313|EMBL:EDY20708.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
serine acetyltransferase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745ABA
cysE; Serine acetyltransferase
14_1009_05_20cm_scaffold_822_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7878..8858
DNA (981bp) protein (327aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBL0_9BACT
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
14_1009_05_20cm_scaffold_822_12
Piscirickettsia salmonis, Piscirickettsia, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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8963..9364
DNA (402bp) protein (134aa)
yciA; acyl-CoA thioester hydrolase (EC:3.1.2.-)
Uncharacterized protein n=1 Tax=Piscirickettsia salmonis LF-89 = ATCC VR-1361 RepID=U4TED0_PISSA
Acyl-CoA hydrolase {ECO:0000313|EMBL:KGP98114.1}; TaxID=1238 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Piscirickettsia.;" source="Piscirickettsia salmonis.;"
14_1009_05_20cm_scaffold_822_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9472..10659
DNA (1188bp) protein (396aa)
Glycosyl transferase group 1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6F7_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:EDY18066.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glycosyl transferase group 1
14_1009_05_20cm_scaffold_822_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(10695..11753)
DNA (1059bp) protein (353aa)
Glucose-6-P dehydrogenase subunit-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3W6_9BACT
Glucose-6-P dehydrogenase subunit-like protein {ECO:0000313|EMBL:EDY18946.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glucose-6-P dehydrogenase subunit
14_1009_05_20cm_scaffold_822_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(11757..13298)
DNA (1542bp) protein (514aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3W7_9BACT
14_1009_05_20cm_scaffold_822_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(13387..15120)
DNA (1734bp) protein (578aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Serine hydroxymethyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3W9_9BACT
glyA; protein-tyrosine-phosphatase, ribose 5-phosphate isomerase and glycine/serine hydroxymethyltransferase
14_1009_05_20cm_scaffold_822_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(15332..15643)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISN0_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40120.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_1009_05_20cm_scaffold_822_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

15814..16638
DNA (825bp) protein (275aa)
Cyclic nucleotide-binding protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D080_9BACT
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:EDY20394.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cyclic nucleotide-binding protein
14_1009_05_20cm_scaffold_822_19
unknown

Not on your lists

16706..16885
DNA (180bp) protein (60aa)

This feature has no annotations

14_1009_05_20cm_scaffold_822_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

17017..18021
DNA (1005bp) protein (335aa)
Lipid A biosynthesis acyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8M8_9BACT
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:EDY17250.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
lipid A biosynthesis acyltransferase
14_1009_05_20cm_scaffold_822_21
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

18222..20045
DNA (1824bp) protein (608aa)
Putative methylcrotonoyl-CoA carboxylase beta chain, mitochondrial {ECO:0000313|EMBL:CCB85219.1}; EC=6.4.1.4 {ECO:0000313|EMBL:CCB85219.1};; TaxID=765952 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae (strain UV7).;"
Putative methylcrotonoyl-CoA carboxylase beta chain, mitochondrial n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KVT2_PARAV
methylcrotonoyl-CoA carboxylase subunit beta
14_1009_05_20cm_scaffold_822_22
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

20101..20421
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KVS7_PARAV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIA76329.1}; TaxID=83552 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae.;"
Displaying 22 items

View Taxonomy
NameRatio
Chthoniobacter flavus
63.64%
Parachlamydia acanthamoebae
9.09%
unknown
4.55%
uncultured bacterium
4.55%
RHI_Verrucumicrobia_41_10
4.55%
Piscirickettsia salmonis
4.55%
Candidatus Koribacter versatilis
4.55%
Akkermansia sp. CAG:344
4.55%
Chthoniobacter flavus: 0.6363636363636364Parachlamydia acanthamoebae: 0.09090909090909091Akkermansia sp. CAG:344: 0.045454545454545456Candidatus Koribacter versatilis: 0.045454545454545456Piscirickettsia salmonis: 0.045454545454545456RHI_Verrucumicrobia_41_10: 0.045454545454545456uncultured bacterium: 0.045454545454545456unknown: 0.045454545454545456Chthoniobacter flavusParachlamydia acanthamoebae